Transcript Information: S_Transcript_178822.p1


Annotated TAIR IDAT5G03450.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:858954-862238 | Reverse length=630
E-Value1E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.153516348406
Replicate 28.0803210162873
Replicate 38.4578152740079
Condition 2: 8 Hour
Replicate 18.7610679965292
Replicate 27.908519742069
Replicate 38.6213778529702
Condition 3: 24 Hour
Replicate 111.131150823233
Replicate 29.8883509106993
Replicate 38.2734731647355


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_178822.p1 GENE.S_Transcript_178822~~S_Transcript_178822.p1 ORF type:complete len:314 (+),score=84.85,zf-RING_UBOX|PF13445.2|4.5e-09,zf-RING_2|PF13639.2|9e-09,zf-C3HC4_2|PF13923.2|3.4e-07,zf-C3HC4|PF00097.21|7.7e-07,zf-C3HC4_4|PF15227.2|1.7e-05,zf-rbx1|PF12678.3|7.2e-06,zf-rbx1|PF12678.3|9.5e+02,zf-ANAPC11|PF12861.3|1.6e-05 S_Transcript_178822:38-979(+)
ATGGCGGGAAACTGGTACGGCACTTTTTTCGACGCCATGAACATCGTTACCGGCGACATCCACAACCCTCCATATCCAGCAGAAGAACAAGAGCACGATGAAGATGAAGATGAATTCGTCGACGAAGATGATGACGATGACTATGAAGATGAAGAAGATGAGGAAGAAGAAGAAGAAGATGATGTGCAAGTACTCAATGAGATACCTCCTCCTCCTCAACCGTCATCCCCTAATCCTGTTCCTGTTGCTGCTACGGCGTCGTCTAGGGTTGAGGAGACAGAAGAGGATTTGAGTTTGATGGATTTTGAAAAGCATTATAGTCCGAAAGAAACGACTAGAGAAGAAATTGATGGCTTGTTTTGTCCTATTTGTATGGAGCCTTGGTCTAATGCCGGTGATCATCAACCTAGCTGTCTTGCTTGCGGGCATTTGTTTGGAATGTCTTGCATTAAAAAGTGGCTTGGTCAACGAAGAAACTCAGGGAAGTGCCCCCAATGCAACAAGAAGTGTACATTGAAGGATGTCAGGAGGATCTATGGGTCACAAGTAGTTGTAGTTGATGAAGAATCACAGAAGAGAATACGATTTCTTGAGGCTAAATGTAATGCTCTTCAGAAAAAGGATGAAGAATGGCGCAAGAAGGAAGTGGAGTGGCATATGAAAGTATTAGTTTGTCAGAAGAAAGAGACGGAGTTATGTCAGCAGTTACAGCAGCTTAATGAGAGGTCCAGCAACCTTGAGCGTACGCTAAAAGGCCTAGAAGGTAAACCACTGAGCTTAAGTGGTGCTGCTAATGGCTTTGATGGGCGATCAACTAGAGAGCACCAAGTTGGAAGAACTGCTACTCCACTATCTTCTTGTTCTTTTAAATTCCAGGAAGAGAGAAAAATGAAATCTTCAATGGATTGTGATCCGAACATTCCTCTGGTGATGCAATGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_178822.p1 GENE.S_Transcript_178822~~S_Transcript_178822.p1 ORF type:complete len:314 (+),score=84.85,zf-RING_UBOX|PF13445.2|4.5e-09,zf-RING_2|PF13639.2|9e-09,zf-C3HC4_2|PF13923.2|3.4e-07,zf-C3HC4|PF00097.21|7.7e-07,zf-C3HC4_4|PF15227.2|1.7e-05,zf-rbx1|PF12678.3|7.2e-06,zf-rbx1|PF12678.3|9.5e+02,zf-ANAPC11|PF12861.3|1.6e-05 S_Transcript_178822:38-979(+)
MAGNWYGTFFDAMNIVTGDIHNPPYPAEEQEHDEDEDEFVDEDDDDDYEDEEDEEEEEEDDVQVLNEIPPPPQPSSPNPVPVAATASSRVEETEEDLSLMDFEKHYSPKETTREEIDGLFCPICMEPWSNAGDHQPSCLACGHLFGMSCIKKWLGQRRNSGKCPQCNKKCTLKDVRRIYGSQVVVVDEESQKRIRFLEAKCNALQKKDEEWRKKEVEWHMKVLVCQKKETELCQQLQQLNERSSNLERTLKGLEGKPLSLSGAANGFDGRSTREHQVGRTATPLSSCSFKFQEERKMKSSMDCDPNIPLVMQW*

Click here to download the sequence:
Link to NCBI Protein BLAST