Transcript Information: S_Transcript_17890.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value5E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.23551328526708
Replicate 20.39049185057548
Replicate 30.32642010767435
Condition 2: 8 Hour
Replicate 10
Replicate 20.19798096141351
Replicate 30
Condition 3: 24 Hour
Replicate 10.57995265904232
Replicate 20.40112940843093
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_17890.p1 GENE.S_Transcript_17890~~S_Transcript_17890.p1 ORF type:internal len:113 (+),score=17.10,zf-RVT|PF13966.2|4.6e-06,zf-RVT|PF13966.2|8.9e+02 S_Transcript_17890:1-336(+)
CTGCAGCGACGCTACCCACGTTGGTGTCTGTCCCCTGGTGTTTGTGTTATGTGTCGTAGAGAGAATGAGACCAATTCTCATCTTTTTTTGACCTGTGACGTGGCGCAAGGCTTATGGCGTAGGCTTTTTGGGGTGAGGGGAGAGAGTTGGGTTTGCCCGCCTACTGCCTCTCATCTCTTGTTGGGTCGTTATGTGGGTTTTGGGAGAGGAAAAGGCCAGAGCTTGTTGTGGCGTGGTGCTATGGTGGCTATGCTTTGGAGTATTTGGCTAGAGAGGAATGCAAGGATTTTCCATGGGGTGGTAACTCCCCCTGCTTTTGTCTGGGATAGGGTGGTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_17890.p1 GENE.S_Transcript_17890~~S_Transcript_17890.p1 ORF type:internal len:113 (+),score=17.10,zf-RVT|PF13966.2|4.6e-06,zf-RVT|PF13966.2|8.9e+02 S_Transcript_17890:1-336(+)
LQRRYPRWCLSPGVCVMCRRENETNSHLFLTCDVAQGLWRRLFGVRGESWVCPPTASHLLLGRYVGFGRGKGQSLLWRGAMVAMLWSIWLERNARIFHGVVTPPAFVWDRVV

Click here to download the sequence:
Link to NCBI Protein BLAST