Transcript Information: S_Transcript_17892.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value9E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3212128272785
Replicate 22.347105272076
Replicate 31.307995466922
Condition 2: 8 Hour
Replicate 10.45373170887517
Replicate 21.1106591523269
Replicate 31.511762241488
Condition 3: 24 Hour
Replicate 11.2394260136507
Replicate 21.2858900185162
Replicate 31.6099177279861


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_17892.p1 GENE.S_Transcript_17892~~S_Transcript_17892.p1 ORF type:5prime_partial len:141 (+),score=15.76,zf-RVT|PF13966.2|7.2e-06,zf-RVT|PF13966.2|1.1e+03 S_Transcript_17892:1-423(+)
CTGCAGCGACGCTACCCACGTTGGTGTCTGTCCCCTGGTGTTTGTGTTATGTGTCGTAGAGAGAATGAGACCAATTCTCATCTTTTTTTGACCTGTGACGTGGCGCAAGGCTTATGGCGTAGGCTTTTTGGGGTGAAGGGAGAGATTTGGGTTTGCCCACCAACTGTTTCTCATCATTTGTTGGGTCATTATGTGGGTTTTGGGAGAGGAAAAGGCCAGAGTTTGTTGTGGCGTGGTGCGATGGTGGCAATGTTATGGAGCATTTGGCTAGAAAGGAATGCAAGGATCTTCCATGGGGCGATAACCCCCCCTGCTTTTGTTTGGGAGAGGGTGTTGTTTAGGGCCTCTTTATGGGCCCGGGCTTTTGGTGCTTTCCGTGATGTACCCTTGTCTGCGGTTGTGCGACATTGGGATATTCTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_17892.p1 GENE.S_Transcript_17892~~S_Transcript_17892.p1 ORF type:5prime_partial len:141 (+),score=15.76,zf-RVT|PF13966.2|7.2e-06,zf-RVT|PF13966.2|1.1e+03 S_Transcript_17892:1-423(+)
LQRRYPRWCLSPGVCVMCRRENETNSHLFLTCDVAQGLWRRLFGVKGEIWVCPPTVSHHLLGHYVGFGRGKGQSLLWRGAMVAMLWSIWLERNARIFHGAITPPAFVWERVLFRASLWARAFGAFRDVPLSAVVRHWDIL*

Click here to download the sequence:
Link to NCBI Protein BLAST