Transcript Information: S_Transcript_178929.p1


Annotated TAIR IDAT5G56130.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)TEX1, AtTEX1, THO3
Annotation TypeOrtholog
Chromosome Positionchr5:22722755-22725065 | Reverse length=315
E-Value4.8E-183
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5131137826022
Replicate 22.3612350028109
Replicate 32.2205300970221
Condition 2: 8 Hour
Replicate 14.2080201629125
Replicate 20.59857789002613
Replicate 32.9229088689105
Condition 3: 24 Hour
Replicate 11.534256031112
Replicate 21.7433701212575
Replicate 31.2653199534339


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_178929.p1 GENE.S_Transcript_178929~~S_Transcript_178929.p1 ORF type:complete len:299 (+),score=54.42,WD40|PF00400.28|0.00032,WD40|PF00400.28|9.5e-05,WD40|PF00400.28|1.2e+03,WD40|PF00400.28|0.015,WD40|PF00400.28|3.5e+02,WD40|PF00400.28|2.8e+03,eIF2A|PF08662.7|1,eIF2A|PF08662.7|0.0082,eIF2A|PF08662.7|1.2e+02 S_Transcript_178929:240-1136(+)
ATGGCGGAGACCAAACCAGAGGAAGCCTCCATATCCATATCCTTCCAGATTCTTCACAGCCGAGAGTTTCAAGGTCACAAAAAGAAGGTGCATTCAGTAGCATGGAATTGCACTGGAACGAAGCTTGCTTCCGGTTCGGTTGATCAAACCGCTCGAATTTGGCATATTGAGCCTCACTCCCATGGCAAGGTAAAAGATATTGAACTGAAGGGGCACACTGACAGTGTTGACCAACTATGCTGGGATCCTAAACATGCAGACCTGCTGGCAACAGCATCAGGGGACAAAACAGTTCGTTTGTGGGATGCTCGTAGTGGGAAATGCTCACAACAAGTGGAACTTAGTGGAGAAAATATTAACATTACTTATAAGCCTGATGGGACACACATAGCAGTTGGAAACAGGGTAAACGAGATTGCATGGGACATGTCTGGAGAGAAGTTCTTTCTGACAACAGGAAATGGTACTGTGGAAGTTCTAGCATACCCCTCTCTAAGGGCACTTGACACCCTGATGGCCCATACAGCTGGTTGCTATTGCATCGCAATTGATCCACTGGGCAGATATTTTGCAGTTGGAAGTGCAGACTCCTTGGTCAGCCTTTGGGATATTAAAGAGATGCTATGTGTACGAACATTTACGAAACTGGAGTGGCCTGTCCGGACAATAAGCTTCAATCACACTGGAGAGTATATTGCTTCAGCCAGTGAGGATTTATTCATTGATATCTCAAATGTTGACACTGGAAGATCAGTCCATCAAATACCCTGCCGAGCAGCAATGAACAGTGTTGAATGGAACCCAAAATGCAACTTACTTGCGTATGCTGGAGATGATAAAAACAAATATCAAGCAGATGAAGGTGTATTTCGTGTCTTTGGTTTTGAAAGTGCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_178929.p1 GENE.S_Transcript_178929~~S_Transcript_178929.p1 ORF type:complete len:299 (+),score=54.42,WD40|PF00400.28|0.00032,WD40|PF00400.28|9.5e-05,WD40|PF00400.28|1.2e+03,WD40|PF00400.28|0.015,WD40|PF00400.28|3.5e+02,WD40|PF00400.28|2.8e+03,eIF2A|PF08662.7|1,eIF2A|PF08662.7|0.0082,eIF2A|PF08662.7|1.2e+02 S_Transcript_178929:240-1136(+)
MAETKPEEASISISFQILHSREFQGHKKKVHSVAWNCTGTKLASGSVDQTARIWHIEPHSHGKVKDIELKGHTDSVDQLCWDPKHADLLATASGDKTVRLWDARSGKCSQQVELSGENINITYKPDGTHIAVGNRVNEIAWDMSGEKFFLTTGNGTVEVLAYPSLRALDTLMAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVDTGRSVHQIPCRAAMNSVEWNPKCNLLAYAGDDKNKYQADEGVFRVFGFESA*

Click here to download the sequence:
Link to NCBI Protein BLAST