Transcript Information: S_Transcript_178930.p1


Annotated TAIR IDAT5G56130.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)TEX1, AtTEX1, THO3
Annotation TypeOrtholog
Chromosome Positionchr5:22722755-22725065 | Reverse length=315
E-Value8.6E-210
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 134.960557523234
Replicate 231.586788776442
Replicate 330.184229552974
Condition 2: 8 Hour
Replicate 136.822723653186
Replicate 236.128451219434
Replicate 333.827323373123
Condition 3: 24 Hour
Replicate 133.242214007426
Replicate 227.661111644424
Replicate 331.48839084117


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_178930.p1 GENE.S_Transcript_178930~~S_Transcript_178930.p1 ORF type:complete len:322 (+),score=56.17,WD40|PF00400.28|0.00036,WD40|PF00400.28|0.00011,WD40|PF00400.28|5.2e+03,WD40|PF00400.28|4.7e+03,WD40|PF00400.28|0.016,WD40|PF00400.28|3.9e+02,WD40|PF00400.28|3e+03,eIF2A|PF08662.7|1.2,eIF2A|PF08662.7|0.015,eIF2A|PF08662.7|0.0056,eIF2A|PF08662.7|1.5e+02 S_Transcript_178930:240-1205(+)
ATGGCGGAGACCAAACCAGAGGAAGCCTCCATATCCATATCCTTCCAGATTCTTCACAGCCGAGAGTTTCAAGGTCACAAAAAGAAGGTGCATTCAGTAGCATGGAATTGCACTGGAACGAAGCTTGCTTCCGGTTCGGTTGATCAAACCGCTCGAATTTGGCATATTGAGCCTCACTCCCATGGCAAGGTAAAAGATATTGAACTGAAGGGGCACACTGACAGTGTTGACCAACTATGCTGGGATCCTAAACATGCAGACCTGCTGGCAACAGCATCAGGGGACAAAACAGTTCGTTTGTGGGATGCTCGTAGTGGGAAATGCTCACAACAAGTGGAACTTAGTGGAGAAAATATTAACATTACTTATAAGCCTGATGGGACACACATAGCAGTTGGAAACAGGGATGATGAACTCACTATACTGGACGTTAGAAAATTTAAGCCCATACATAGAAGGAAGTTCAACTATGAGGTAAACGAGATTGCATGGGACATGTCTGGAGAGAAGTTCTTTCTGACAACAGGAAATGGTACTGTGGAAGTTCTAGCATACCCCTCTCTAAGGGCACTTGACACCCTGATGGCCCATACAGCTGGTTGCTATTGCATCGCAATTGATCCACTGGGCAGATATTTTGCAGTTGGAAGTGCAGACTCCTTGGTCAGCCTTTGGGATATTAAAGAGATGCTATGTGTACGAACATTTACGAAACTGGAGTGGCCTGTCCGGACAATAAGCTTCAATCACACTGGAGAGTATATTGCTTCAGCCAGTGAGGATTTATTCATTGATATCTCAAATGTTGACACTGGAAGATCAGTCCATCAAATACCCTGCCGAGCAGCAATGAACAGTGTTGAATGGAACCCAAAATGCAACTTACTTGCGTATGCTGGAGATGATAAAAACAAATATCAAGCAGATGAAGGTGTATTTCGTGTCTTTGGTTTTGAAAGTGCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_178930.p1 GENE.S_Transcript_178930~~S_Transcript_178930.p1 ORF type:complete len:322 (+),score=56.17,WD40|PF00400.28|0.00036,WD40|PF00400.28|0.00011,WD40|PF00400.28|5.2e+03,WD40|PF00400.28|4.7e+03,WD40|PF00400.28|0.016,WD40|PF00400.28|3.9e+02,WD40|PF00400.28|3e+03,eIF2A|PF08662.7|1.2,eIF2A|PF08662.7|0.015,eIF2A|PF08662.7|0.0056,eIF2A|PF08662.7|1.5e+02 S_Transcript_178930:240-1205(+)
MAETKPEEASISISFQILHSREFQGHKKKVHSVAWNCTGTKLASGSVDQTARIWHIEPHSHGKVKDIELKGHTDSVDQLCWDPKHADLLATASGDKTVRLWDARSGKCSQQVELSGENINITYKPDGTHIAVGNRDDELTILDVRKFKPIHRRKFNYEVNEIAWDMSGEKFFLTTGNGTVEVLAYPSLRALDTLMAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDIKEMLCVRTFTKLEWPVRTISFNHTGEYIASASEDLFIDISNVDTGRSVHQIPCRAAMNSVEWNPKCNLLAYAGDDKNKYQADEGVFRVFGFESA*

Click here to download the sequence:
Link to NCBI Protein BLAST