Transcript Information: S_Transcript_178931.p2


Annotated TAIR IDAT5G56130.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)TEX1, AtTEX1, THO3
Annotation TypeOrtholog
Chromosome Positionchr5:22722755-22725065 | Reverse length=315
E-Value5.4E-82
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 21.1766821097341
Replicate 32.7049346255947
Condition 2: 8 Hour
Replicate 10.42650780634266
Replicate 20.44743697279453
Replicate 31.8473734590984
Condition 3: 24 Hour
Replicate 12.7670185754753
Replicate 23.3240256978643
Replicate 32.3540574778108


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_178931.p2 GENE.S_Transcript_178931~~S_Transcript_178931.p2 ORF type:complete len:150 (+),score=28.80,WD40|PF00400.28|0.00011,WD40|PF00400.28|3.2e-05,WD40|PF00400.28|7.7e+03 S_Transcript_178931:240-689(+)
ATGGCGGAGACCAAACCAGAGGAAGCCTCCATATCCATATCCTTCCAGATTCTTCACAGCCGAGAGTTTCAAGGTCACAAAAAGAAGGTGCATTCAGTAGCATGGAATTGCACTGGAACGAAGCTTGCTTCCGGTTCGGTTGATCAAACCGCTCGAATTTGGCATATTGAGCCTCACTCCCATGGCAAGGTAAAAGATATTGAACTGAAGGGGCACACTGACAGTGTTGACCAACTATGCTGGGATCCTAAACATGCAGACCTGCTGGCAACAGCATCAGGGGACAAAACAGTTCGTTTGTGGGATGCTCGTAGTGGGAAATGCTCACAACAAGTGGAACTTAGTGGAGAAAATATTAACATTACTTATAAGCCTGATGGGACACACATAGCAGTTGGAAACAGGGTAAAATTTGTAACTTCTACTCTCACTGTTGCTAATGTTGTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_178931.p2 GENE.S_Transcript_178931~~S_Transcript_178931.p2 ORF type:complete len:150 (+),score=28.80,WD40|PF00400.28|0.00011,WD40|PF00400.28|3.2e-05,WD40|PF00400.28|7.7e+03 S_Transcript_178931:240-689(+)
MAETKPEEASISISFQILHSREFQGHKKKVHSVAWNCTGTKLASGSVDQTARIWHIEPHSHGKVKDIELKGHTDSVDQLCWDPKHADLLATASGDKTVRLWDARSGKCSQQVELSGENINITYKPDGTHIAVGNRVKFVTSTLTVANVV*

Click here to download the sequence:
Link to NCBI Protein BLAST