Transcript Information: S_Transcript_17894.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value1E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.74219525357077
Replicate 21.5821920798218
Replicate 30.95520147046537
Condition 2: 8 Hour
Replicate 11.0195405729307
Replicate 21.4260939371937
Replicate 31.6135502171101
Condition 3: 24 Hour
Replicate 11.8276595749103
Replicate 20.90294070025288
Replicate 31.6077797230353


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_17894.p1 GENE.S_Transcript_17894~~S_Transcript_17894.p1 ORF type:5prime_partial len:251 (+),score=32.34,zf-RVT|PF13966.2|2.3e-18,zf-RVT|PF13966.2|2.4e+03 S_Transcript_17894:1-753(+)
GATGCCCCTATTTCCTCCTTTTTTTCTGTACCTCAGAGTAGTTGGGACCTTCATCTTCGGAGGGACCCTCTTGATTGGGAAGTGGAAGAGCTGGTTTCCCTTGTGAGTCTTTTGGATACCCTACACCTTAGGGATGGGGTGGATTCCAGGACTTGGTTGGGGGATTCCTCTGGAATCTTCTCATGCAAGTCCTTTCTTCGCCAGCTCGGCCCTCTTCCCAGTCCCTCCCCTTTCCCCATGGCTTCGGTTATCTGGAAGTCCAAAGTGCCCTCTAAGGTGCGTGCTTTTTTGTGGACAGTTGCCTTGGACCGTGTTAATACCCATGATGTTCTGCAACGACGTTATGCACATTGGTGTCTTTCTCCTGGAGTTTGTGTTATGTGTCGAAGAGAGAATGAGACCAATTCTCATCTTTTTTTGACCTGTGACGTGGCGCAAGGCTTATGGCGTAGGCTTTTTGGGGTGAAGGGAGAGATTTGGGTTTGCCCACCAACTGTTTCTCACCTTTTGTTGGGTCGCTATGCGGGTTTTGGGAGAGGAAAGGACCAGAGATTGTTGTGGCGTGGTGCGACGGGGGCTATGATATGGAGCATTTGGCTAGAAAGGAATGCAAGGATCTTCCATGGGGCGATAACCCCCCCTGCTTTTGTTTGGGAGAGGGTGTTGTTTAGGGCCTCTTTATGGGCCCGGGCTTTTGGTGCTTTCCGTGATGTACCCTTGTCTGCGGTTGTGCGACATTGGGATATTCTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_17894.p1 GENE.S_Transcript_17894~~S_Transcript_17894.p1 ORF type:5prime_partial len:251 (+),score=32.34,zf-RVT|PF13966.2|2.3e-18,zf-RVT|PF13966.2|2.4e+03 S_Transcript_17894:1-753(+)
DAPISSFFSVPQSSWDLHLRRDPLDWEVEELVSLVSLLDTLHLRDGVDSRTWLGDSSGIFSCKSFLRQLGPLPSPSPFPMASVIWKSKVPSKVRAFLWTVALDRVNTHDVLQRRYAHWCLSPGVCVMCRRENETNSHLFLTCDVAQGLWRRLFGVKGEIWVCPPTVSHLLLGRYAGFGRGKDQRLLWRGATGAMIWSIWLERNARIFHGAITPPAFVWERVLFRASLWARAFGAFRDVPLSAVVRHWDIL*

Click here to download the sequence:
Link to NCBI Protein BLAST