Transcript Information: S_Transcript_17920.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value4E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.44355002058634
Replicate 20.51479842300868
Replicate 30.43033050861735
Condition 2: 8 Hour
Replicate 11.0662695158566
Replicate 21.4914565759818
Replicate 31.5631621576986
Condition 3: 24 Hour
Replicate 11.0194278962277
Replicate 20.6043683087026
Replicate 30.50444088810232


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_17920.p1 GENE.S_Transcript_17920~~S_Transcript_17920.p1 ORF type:internal len:300 (+),score=23.27,RVT_1|PF00078.23|2.8e-21 S_Transcript_17920:1-897(+)
GAGCGGTGGCGTAAGTGGATTCGGGGCTGCTTTAGTAATGCTAGCTTCTCGGTACTGATTAATGGGGCCCCCAGAGACTGGTTTCCTTCTTCCCGGGGTTTGAGACAGGGGGACCCTCTATCCCCTTTCCTTTTCACCTTGGTGGTGGACGTCTTGAGCCGTATGATAGATAGGGGGGTGGAGGTAGGGGAAGTGGAGTGTTTTAGGGTCGGAAGGGAAAGTGTTTTGGTATCCCACCTCCAGTTTGCAGATGACACGATTCTTTTCCTCTCTGCGAGCCAGGAGGTTCTTCGCAAGGTCCTTACCCTTTTGGAGATCTTTGAGTTGGTCTCAGGGTTACGTGTTAATCTTTCTAAATGCGGTCTAGCTGGCATTAACGTGGAGGAGGGGTTCCTGGAGGGTCTTGCCAGGGAGGTGGGCTGCGGGGTTCAACATTGGCCTGTTAACTACTTAGGCCTTCCGTTGGGGGGTAATCCTAGGGCAGCATCTTTTTGGGATCCTGTGGTGTCTAGAGTTGCTAAGCGACTGGATGGCTGGAAGGGGAGATATTTTTCGCTGGGCGGTCGCATATCACTCATTCAGTCTTGCCTTGCTAGCATCCCTCTTTATTTTCTTTCTCTGTTTAGGGTGCCAGTGGGGGTGGCTAACAAAATTGAGAAGATTATGCGTGACTTCCTTTGGTCTAGAGCAGGGGGCGAGAAGGGAACTAACCTTGTTAGGTGGGATTTAGTGTGTCGACCTAAGGAAGAGGGAGGCCTTGGTTTCGGTAGGCTGGTGTCTAAGAACATTTCTTTGGCTGGGAAGTGGCTGTGGAGGTTTCTTCTGGAACGTGAGTCTTTTTGGCACAGTGTCATCCGGAGTAAATACGGGCTTCTTCAGAATGGATGGGACGCCTTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_17920.p1 GENE.S_Transcript_17920~~S_Transcript_17920.p1 ORF type:internal len:300 (+),score=23.27,RVT_1|PF00078.23|2.8e-21 S_Transcript_17920:1-897(+)
ERWRKWIRGCFSNASFSVLINGAPRDWFPSSRGLRQGDPLSPFLFTLVVDVLSRMIDRGVEVGEVECFRVGRESVLVSHLQFADDTILFLSASQEVLRKVLTLLEIFELVSGLRVNLSKCGLAGINVEEGFLEGLAREVGCGVQHWPVNYLGLPLGGNPRAASFWDPVVSRVAKRLDGWKGRYFSLGGRISLIQSCLASIPLYFLSLFRVPVGVANKIEKIMRDFLWSRAGGEKGTNLVRWDLVCRPKEEGGLGFGRLVSKNISLAGKWLWRFLLERESFWHSVIRSKYGLLQNGWDAF

Click here to download the sequence:
Link to NCBI Protein BLAST