Transcript Information: S_Transcript_179395.p1


Annotated TAIR IDAT3G18800.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 12 growth stages; Has 58 Blast hits to 58 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 58; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:6479746-6480339 | Forward length=197
E-Value6.4E-47
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.87744062415
Replicate 220.160824940488
Replicate 316.057899521066
Condition 2: 8 Hour
Replicate 118.567796741642
Replicate 221.021823290778
Replicate 323.153420674376
Condition 3: 24 Hour
Replicate 112.805621356555
Replicate 219.147013228293
Replicate 318.046807634695


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_179395.p1 GENE.S_Transcript_179395~~S_Transcript_179395.p1 ORF type:5prime_partial len:116 (-),score=30.85 S_Transcript_179395:270-617(-)
ATCTTCTATGTCTCTGTTGCTCAAACTCTTAGATGTATCAATGGGCTGAAGTACCAAAGAAGGTGTCATAAGCTCACTTTGGGCCTTGCCACTGAGAAGCTCAGATTGCTTAAGATCAGAACAGGGTATGTATTTGATGATCAAAATGCTGCTGAGAATTATGGTGGTGGAAATGATAGCAATAATGCTGGGGTGGTTGTTAATGGGGAAGAGTTTGAGATTCATTATCAAGAACCACCTGAGAGTTATTTTGGCAAGTTTAAGAGAAACTGGGCTCTTTATTTTGGATTCTTGATCTTGATTTATGGGTTCATGATTTCTTCCTCTGTTGTTCTTCTTTGCTTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_179395.p1 GENE.S_Transcript_179395~~S_Transcript_179395.p1 ORF type:5prime_partial len:116 (-),score=30.85 S_Transcript_179395:270-617(-)
IFYVSVAQTLRCINGLKYQRRCHKLTLGLATEKLRLLKIRTGYVFDDQNAAENYGGGNDSNNAGVVVNGEEFEIHYQEPPESYFGKFKRNWALYFGFLILIYGFMISSSVVLLCF*

Click here to download the sequence:
Link to NCBI Protein BLAST