Transcript Information: S_Transcript_179641.p1


Annotated TAIR IDAT5G39570.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT3G29075.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:15844021-15845827 | Forward length=381
E-Value0.0006
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.47446859263473
Replicate 30.99154495073121
Condition 2: 8 Hour
Replicate 13.6688843556358
Replicate 21.6839025857859
Replicate 31.6044186369341
Condition 3: 24 Hour
Replicate 10.46978244065794
Replicate 20.4873937973408
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_179641.p1 GENE.S_Transcript_179641~~S_Transcript_179641.p1 ORF type:5prime_partial len:93 (+),score=3.82 S_Transcript_179641:1-279(+)
CCTCGTTCTCTTTCTCTCCCTCTGCCTCCCTTTAGGAGACATACACCTTCCTTTCTCTCTCCAATTTTGATTTTTCTCATCTTTCATCGCTTCCATCACTTCTTTCTTGATTCGGTTCTTGATTTCAGTTCAGCTCTCCTCTTTCACCGTAATTCGGTCCAGCTCTTTCACCGTAATTCGGTTCAGATTTTTCACCGTAATTCGGTTCAGATTTTCCCCCGTAATTCGGTTCAGATTTTTCCCCGTAATTCGGTTGAAGGTAAATGGAGGAAATTCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_179641.p1 GENE.S_Transcript_179641~~S_Transcript_179641.p1 ORF type:5prime_partial len:93 (+),score=3.82 S_Transcript_179641:1-279(+)
PRSLSLPLPPFRRHTPSFLSPILIFLIFHRFHHFFLDSVLDFSSALLFHRNSVQLFHRNSVQIFHRNSVQIFPRNSVQIFPRNSVEGKWRKF*

Click here to download the sequence:
Link to NCBI Protein BLAST