Transcript Information: S_Transcript_179801.p1


Annotated TAIR IDAT5G42240.1
Annotated Gene Nameserine carboxypeptidase-like 42
Annotated Gene Symbol(s)scpl42
Annotation TypeOrtholog
Chromosome Positionchr5:16888717-16890931 | Forward length=473
E-Value1.2E-197
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.9660624314452
Replicate 25.0142703539806
Replicate 36.0005074338987
Condition 2: 8 Hour
Replicate 18.3158818700782
Replicate 210.061979770977
Replicate 39.6890216386279
Condition 3: 24 Hour
Replicate 17.4732496152033
Replicate 27.1027734844534
Replicate 35.7926226384956


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_179801.p1 GENE.S_Transcript_179801~~S_Transcript_179801.p1 ORF type:3prime_partial len:418 (+),score=48.58,Peptidase_S10|PF00450.18|3.1e-106 S_Transcript_179801:101-1351(+)
ATGAGAGTGAATATGGGCAACCGGGTTCGAGTAAGCGGTATGTGTTGGTGGTTCGTGGTGGCTGTCACCACATTGATGGGTTTTGGGGAGAATGCCAAGGGGTATCCAATGGAGGATCTCGTGGTAAAATTACCCGGGCAACCAAAGGTAGGGTTTAAGCAATTCGCTGGGTACGTTGATGTGGATGTTAACCATGGAACGAGTTTGTTTTACTATTTTGTTGAAGCTGACAAAGAACCTCGCCATAAACCCCTTGCTCTTTGGCTCAATGGAGGTTGCTCGTCTATAGGTGGTGGAGCTTTTACGGAATTGGGTCCATTCGTTCCCCTCCGTATTGGTAGAGGCCTTGGGAGAAATTCAATGTCATGGAATAGAGCCTCGAACCTTCTCTTTGTGGACTCACCAGCAGGGGTAGGATGGTCATATTCAAACACAACATCTGACTATAAAGTTACGGATGCCTCCACTGTAAAGGACATCGTCACATTTCTGTTGAATTGGCTTGAAAAGTTCCCTGAATTCAAATCTAGGGATCTGTTCCTTACTGGAGAGAGTTATGCAGGGCACTACCTACCGCAGTTAGCTGTTGCATTGTTGGATCATAATGCTCATTCAACAAAGTTTAAGTTCAACTTGAAAGGAGTTGCGATGGGGAATCCGCTTCTGAAATATGAACGGGATGTTCCAGCAGTTTACGAATTCTACTGGTCACATGGAATGCTTTCTGATGAAGTTGGGCTTACCATCATGAATCAATGTAATTTTGAAGATTACACCTTTGATACTCGACACAACGAATCTGAAAGCTGCAACCATGCAATAGAAGAAGCAGACGAGATTGTGGGCTTTTTTATGAATCAATATGATGTGCTCCTTGACGTATGTTATCCTCAATTAATTGTCAATCAAGCGCGTCGGTTCCGAAAAATGGGTACTCAAATGAGTTTAGGGGTTGATGTATGCATGGATTCCGAGTTGGAAATCTACCTCAATCTTCCCCAGGTACAGAAGGCTCTCCATGCAAACAGGACCAATCTCCCATATGAATGGGCTTTGTGTAACGATAACGACATTGTTAAGTACAATGAGTCTGATATGTACTTGGATATGCTTCCCGTGATCAAAAGGATACTTTCACATGGTATTCCTGTTTGGGTTTTCAGCGGAGATCAGGATACTAGTGTACCTTTCATGGGAACACGTACCCTTGTACGTGAGCTTGCTGAGGAACTCAACTTTAAGATGACTGTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_179801.p1 GENE.S_Transcript_179801~~S_Transcript_179801.p1 ORF type:3prime_partial len:418 (+),score=48.58,Peptidase_S10|PF00450.18|3.1e-106 S_Transcript_179801:101-1351(+)
MRVNMGNRVRVSGMCWWFVVAVTTLMGFGENAKGYPMEDLVVKLPGQPKVGFKQFAGYVDVDVNHGTSLFYYFVEADKEPRHKPLALWLNGGCSSIGGGAFTELGPFVPLRIGRGLGRNSMSWNRASNLLFVDSPAGVGWSYSNTTSDYKVTDASTVKDIVTFLLNWLEKFPEFKSRDLFLTGESYAGHYLPQLAVALLDHNAHSTKFKFNLKGVAMGNPLLKYERDVPAVYEFYWSHGMLSDEVGLTIMNQCNFEDYTFDTRHNESESCNHAIEEADEIVGFFMNQYDVLLDVCYPQLIVNQARRFRKMGTQMSLGVDVCMDSELEIYLNLPQVQKALHANRTNLPYEWALCNDNDIVKYNESDMYLDMLPVIKRILSHGIPVWVFSGDQDTSVPFMGTRTLVRELAEELNFKMTV

Click here to download the sequence:
Link to NCBI Protein BLAST