Transcript Information: S_Transcript_179906.p2


Annotated TAIR IDAT1G75490.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:28336045-28336665 | Forward length=206
E-Value1.9E-51
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.330650061759
Replicate 21.0112111880528
Replicate 31.152671005225
Condition 2: 8 Hour
Replicate 11.4216926878089
Replicate 21.2118084679852
Replicate 30.7993442851868
Condition 3: 24 Hour
Replicate 10.72816278301981
Replicate 20.66102783764346
Replicate 30.84073481350387


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_179906.p2 GENE.S_Transcript_179906~~S_Transcript_179906.p2 ORF type:complete len:240 (+),score=46.16,AP2|PF00847.16|2.4e-13 S_Transcript_179906:3124-3843(+)
ATGTTGAAATCTAAGCTGGGTTTGGGAGAGAAAAAACAGGGGAAGAAACAACATCCTTGCCAAGCCAGCTCTAGGAAAGGATGTATGAGAGGTAAGGGCGGTCCTGAGAATGCCCTTTGTACCTACAAGGGCGTCCGTCAGAGGACGTGGGGCAAATGGGTGGCTGAGATCCGCGAGCCAAACCGTGGGGCACGCCTTTGGCTCGGCACCTTCAACACCTCCCATGAGGCTGCCCTTGCCTATGATGCTGCTGCCAGGAAGCTTTATGGATCTGATGCCAAGCTCAACTTGCCTGAGCTTTATCCACCTAAGCTACCATCCCAATTTTCATCCTCACCACCGGCTCAAACACTGGTCCCGTCAATTCAAATACCTTGCAATTATCAACCTCTTGCTCCGAGCTGTTACAACCTGGCTTGCTCATCTGATAACAGCTCTCTTTCCGGGACAAGTGACGCTAGTTTGCCCATTGAGGAGACTAATTCTACCGTCAGTGTTGAGAGCTTTGGGGAGAATGACGTTGGGGTCAATCATGGCCTCTGGGAGAACCCCAACCCAAGCTTGCCTGAGCTTGATGACACCTTGTGGGCCGAGACAGCAATGACACTTGGGTTCCCTCCCGCTGTTGTTGACTCGCCGGAGTTCACCATCTGTGATGGCCCAGGATTTTCTCCTGGTGACTTGTACGATGGAAGCTTTCAGTTTTCCTGGTCTTCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_179906.p2 GENE.S_Transcript_179906~~S_Transcript_179906.p2 ORF type:complete len:240 (+),score=46.16,AP2|PF00847.16|2.4e-13 S_Transcript_179906:3124-3843(+)
MLKSKLGLGEKKQGKKQHPCQASSRKGCMRGKGGPENALCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFNTSHEAALAYDAAARKLYGSDAKLNLPELYPPKLPSQFSSSPPAQTLVPSIQIPCNYQPLAPSCYNLACSSDNSSLSGTSDASLPIEETNSTVSVESFGENDVGVNHGLWENPNPSLPELDDTLWAETAMTLGFPPAVVDSPEFTICDGPGFSPGDLYDGSFQFSWSS*

Click here to download the sequence:
Link to NCBI Protein BLAST