Transcript Information: S_Transcript_179927.p1


Annotated TAIR IDAT3G47730.1
Annotated Gene NameATP-binding cassette A2
Annotated Gene Symbol(s)ATATH1, ATH1, ABCA2
Annotation TypeOrtholog
Chromosome Positionchr3:17594342-17598828 | Reverse length=983
E-Value7.9E-272
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.21636586370065
Replicate 20
Replicate 30.23990551003058
Condition 2: 8 Hour
Replicate 10.55480690255956
Replicate 20.36376989658092
Replicate 30.27727931843878
Condition 3: 24 Hour
Replicate 10.14208054302826
Replicate 20
Replicate 30.16404581726905


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_179927.p1 GENE.S_Transcript_179927~~S_Transcript_179927.p1 ORF type:complete len:615 (+),score=94.44,ABC2_membrane_3|PF12698.3|1.1e-21 S_Transcript_179927:180-2024(+)
ATGATGGAGTTAAAAAGGGGAATCCCATTACTAGTACAACAATTCAGATCACTAGTAGTGAAGAATGCATTACTATCATGGAGACACAAGTTGTCTACAATCCTTCAAGTCTTTTCTTCATTGGTTTTCATTTTCTTGATGTTTTGTATTCAAAGGGCAGTTGAAGCCCAGTTTAAAGGAACCACTTTTTTTGACAATATTTTGGATCCAAAACCTCTTGTTTCTCCTTCTATCCCACCTTGTGAAGACAAATTCTTCATCAAAAAGCCTTGTTTTGACTTTGTTTATAGTGGCAATTCTAGCAACAATGTTAATCGGCTTGTTGCTCGCATTATGGCTAACAATCCTGGCCGTATAATTCCCTCTTCAAAGGTTAAGTCATTTGGGACTGAGGACGAGGTTGATGCATGGCTTCTTGGCAATCCAATGCATTGTCCAGGGGCGCTGCATTTCATTGAGGAAAACGCGACTGTAATGAGCTATGGTATTCAAACTAATTCTACATCAGTACCTATGAGAGGGAAGTATGAAGATCCAACCTTCAAGTTTCAAATACCGCTTCAGGCTGCTGCAGAACGTGAGATAGCTAGGTTTCTTATTGGAGATGCGAATTTTCGCTGGACTGTTGGCTTCAAAGAATTTGCACATCCTCCTGCAGATCCGTTCAATGTAATCGGCTTTATTGGCCCGACCTTTTTCTTTGCAATGGCCTTATTTGGTTTTGTGTTTCAAATGTCTTCCCTGGTGATGGAGAAAGAACTAAAGCTTAGACAGGCAATGAGTATGATGGGTCTCTATGATACTGCCTACTGGCTATCTTGGATGACTTGGGAAGGTTTCCTTGTGGTTATTTCATCAATTTTCATCGTGCTGTTCGGGATGATGTTCCAGTTTGATTTTTTCTTGCACAATAGTTTCGCGATCTTGTTTCTTGTGTTTTTTCTTTTCCAACTGAACATGACTGCCTTTGCCTTTGCGTTGTCAGCCTTTGTCAACAAGTCAGCTTCATCCACAAGCATAGGATTCTACAGTTTCATTGTTGGATTAGTCACTCAGATTGTGACAGTGGCTGGGTTTCCATATAGCAACACGTTCTCTAAAACATACAGGGTCATATGGTCCTTGTTCCCTCCAAATCTGCTTGCCAAAGCTCTTCAGATGCTGACAGATGCCACTGCCACAAATCAAGATCCTGGACTTAGCTGGAAGGGGCGAACAAAATGTGCTCCCAATGATGATGATTGTGTGTTAACCATGAATGACGTCCTGATATGGTTCGTGGGAACATTCTTTATGTGGTATGTCTTGGCTATCTACTTTGAAAACATAATTCCAAACCCATATGGAGTAAGGAAATCAGTATTTTACTGTTTGAACCCTGGATATTGGACCGGGAAAGGCAAAACCAAGGCTCAAGAGGGTGGCATTTGTACCTGCTTTGGTTCATCCCCGCATCTTGAGCACATTACTCCAGAAGATGAGGATGTTCTGGAAGAGGAGAATACTGTAAAAGGGCAGGTCAATGAAGGTGCAGTTGATCCAAATGTTGCTGTTCAGATACGTGGTCTTGCAAAGGTGTATCCTGGGTCAACCAAGCTTGGTTGCTGTAAATGCAAGAGGACTCCACCTTATCATGCTCTAAGGGTAACACAATCTTTTATAGATATCATTGTGCTGTCGTTTGGCAAAAAGAATCCAGCAAATGGTTGTTTTGTCAAACACTGTGATCAGTTACCTGCTATTTTGAACTTTTCCTCTCCTTTTTTTGACAGGTTTGGGGGGTTGGTTGAGGGGGCAGGGTGTGGCGTTACATGGTGCCCTTGTGGCATGGTCTTTTTGACATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_179927.p1 GENE.S_Transcript_179927~~S_Transcript_179927.p1 ORF type:complete len:615 (+),score=94.44,ABC2_membrane_3|PF12698.3|1.1e-21 S_Transcript_179927:180-2024(+)
MMELKRGIPLLVQQFRSLVVKNALLSWRHKLSTILQVFSSLVFIFLMFCIQRAVEAQFKGTTFFDNILDPKPLVSPSIPPCEDKFFIKKPCFDFVYSGNSSNNVNRLVARIMANNPGRIIPSSKVKSFGTEDEVDAWLLGNPMHCPGALHFIEENATVMSYGIQTNSTSVPMRGKYEDPTFKFQIPLQAAAEREIARFLIGDANFRWTVGFKEFAHPPADPFNVIGFIGPTFFFAMALFGFVFQMSSLVMEKELKLRQAMSMMGLYDTAYWLSWMTWEGFLVVISSIFIVLFGMMFQFDFFLHNSFAILFLVFFLFQLNMTAFAFALSAFVNKSASSTSIGFYSFIVGLVTQIVTVAGFPYSNTFSKTYRVIWSLFPPNLLAKALQMLTDATATNQDPGLSWKGRTKCAPNDDDCVLTMNDVLIWFVGTFFMWYVLAIYFENIIPNPYGVRKSVFYCLNPGYWTGKGKTKAQEGGICTCFGSSPHLEHITPEDEDVLEEENTVKGQVNEGAVDPNVAVQIRGLAKVYPGSTKLGCCKCKRTPPYHALRVTQSFIDIIVLSFGKKNPANGCFVKHCDQLPAILNFSSPFFDRFGGLVEGAGCGVTWCPCGMVFLT*

Click here to download the sequence:
Link to NCBI Protein BLAST