Transcript Information: S_Transcript_179932.p1


Annotated TAIR IDAT3G47730.1
Annotated Gene NameATP-binding cassette A2
Annotated Gene Symbol(s)ATATH1, ATH1, ABCA2
Annotation TypeOrtholog
Chromosome Positionchr3:17594342-17598828 | Reverse length=983
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.5478083070242
Replicate 26.6712046856056
Replicate 36.3569389596724
Condition 2: 8 Hour
Replicate 18.2528600298502
Replicate 28.5654859085021
Replicate 39.1510759583821
Condition 3: 24 Hour
Replicate 16.4700532113525
Replicate 25.4262170131193
Replicate 35.0496146693421


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_179932.p1 GENE.S_Transcript_179932~~S_Transcript_179932.p1 ORF type:complete len:969 (+),score=163.41,ABC_tran|PF00005.23|7.6e-23,ABC2_membrane_3|PF12698.3|2e-21,AAA_21|PF13304.2|0.25,AAA_21|PF13304.2|1.1e-09 S_Transcript_179932:180-3086(+)
ATGATGGAGTTAAAAAGGGGAATCCCATTACTAGTACAACAATTCAGATCACTAGTAGTGAAGAATGCATTACTATCATGGAGACACAAGTTGTCTACAATCCTTCAAGTCTTTTCTTCATTGGTTTTCATTTTCTTGATGTTTTGTATTCAAAGGGCAGTTGAAGCCCAGTTTAAAGGAACCACTTTTTTTGACAATATTTTGGATCCAAAACCTCTTGTTTCTCCTTCTATCCCACCTTGTGAAGACAAATTCTTCATCAAAAAGCCTTGTTTTGACTTTGTTTATAGTGGCAATTCTAGCAACAATGTTAATCGGCTTGTTGCTCGCATTATGGCTAACAATCCTGGCCGTATAATTCCCTCTTCAAAGGTTAAGTCATTTGGGACTGAGGACGAGGTTGATGCATGGCTTCTTGGCAATCCAATGCATTGTCCAGGGGCGCTGCATTTCATTGAGGAAAACGCGACTGTAATGAGCTATGGTATTCAAACTAATTCTACATCAGTACCTATGAGAGGGAAGTATGAAGATCCAACCTTCAAGTTTCAAATACCGCTTCAGGCTGCTGCAGAACGTGAGATAGCTAGGTTTCTTATTGGAGATGCGAATTTTCGCTGGACTGTTGGCTTCAAAGAATTTGCACATCCTCCTGCAGATCCGTTCAATGTAATCGGCTTTATTGGCCCGACCTTTTTCTTTGCAATGGCCTTATTTGGTTTTGTGTTTCAAATGTCTTCCCTGGTGATGGAGAAAGAACTAAAGCTTAGACAGGCAATGAGTATGATGGGTCTCTATGATACTGCCTACTGGCTATCTTGGATGACTTGGGAAGGTTTCCTTGTGGTTATTTCATCAATTTTCATCGTGCTGTTCGGGATGATGTTCCAGTTTGATTTTTTCTTGCACAATAGTTTCGCGATCTTGTTTCTTGTGTTTTTTCTTTTCCAACTGAACATGACTGCCTTTGCCTTTGCGTTGTCAGCCTTTGTCAACAAGTCAGCTTCATCCACAAGCATAGGATTCTACAGTTTCATTGTTGGATTAGTCACTCAGATTGTGACAGTGGCTGGGTTTCCATATAGCAACACGTTCTCTAAAACATACAGGGTCATATGGTCCTTGTTCCCTCCAAATCTGCTTGCCAAAGCTCTTCAGATGCTGACAGATGCCACTGCCACAAATCAAGATCCTGGACTTAGCTGGAAGGGGCGAACAAAATGTGCTCCCAATGATGATGATTGTGTGTTAACCATGAATGACGTCCTGATATGGTTCGTGGGAACATTCTTTATGTGGTATGTCTTGGCTATCTACTTTGAAAACATAATTCCAAACCCATATGGAGTAAGGAAATCAGTATTTTACTGTTTGAACCCTGGATATTGGACCGGGAAAGGCAAAACCAAGGCTCAAGAGGGTGGCATTTGTACCTGCTTTGGTTCATCCCCGCATCTTGAGCACATTACTCCAGAAGATGAGGATGTTCTGGAAGAGGAGAATACTGTAAAAGGGCAGGTCAATGAAGGTGCAGTTGATCCAAATGTTGCTGTTCAGATACGTGGTCTTGCAAAGGTGTATCCTGGGTCAACCAAGCTTGGTTGCTGTAAATGCAAGAGGACTCCACCTTATCATGCTCTAAGGGGATTATGGGTAAATCTTGCTAAGAATCAACTATTTTGCCTTTTGGGACCCAATGGAGCGGGAAAAACTACTGCCATCAATTGTTTAACTGGCATTACGCCTGTGACCAGTGGAGATGCATTGATTTATGGGCATTCCGTCAGAAGCGCTGTTGGCATGTCAAACATTCGAAGAATGATAGGAGTGTGTCCGCAGTTTGATATCCTTTGGGATGTATTGACTGGCCAAGAGCACCTCCGCCTCTTTGCAAGCATAAAGGGTCTGCCGAATGCTACAATTTCAACATTTATTCATAATTCACTGGCTCAAGTGAGATTGACTGATGCTGCCAAAATGAGAACTTCAAGTTACAGTGGTGGAATGAAACGACGTCTTAGTGTTGCAATTGCCCTTATTGGTGATCCGAAGCTAATCATTCTGGATGAACCTACAACAGGTATGGATCCTATTAGCAGGAGGCATGTGTGGGACATCATCGAAGATGCTAAACAAGGCAGGGCTATTATTCTAACAACACATTCAATGGAAGAAGCTGACATATTGAGTGACCGCATTGGAATCATGGCGAAAGGGAGGCTGCGATGCATTGGAACCTCAATCAGGTTGAAATCACGATTCGGAACTGGTTTTGTAGCCAATGTGAGCTTTGTTGGTAACGTAAATGGAACCCCTTCCAATGGAGATGCGATTGATACAACCTCCCAAGAAGCTGTGAAGCATTTCTTCAAGCTACATTTGGATGTGGTGCCTAAGGAGGAGAGCAGAAGCTTCCTGACATTTTTCATTCCACATGAAAAAGAACCACTGTTAACAGGGTTTTTCGAAGAGCTACAAGAGAGAGAACGAGAATTTGGCATAGCCGACATCCAGCTTGGTCTCACCACTCTGGAAGAAGTTTTCCTAAATATTGCAAGACAGGCAGAGATGGAAAGTGCTGCTTCCGAAGGAAAACTGACCACTTTAAACTTAACAACTTCAGGAACCTCGGTTGAGATACCTACTGGAGCTCGTTATGTGGGGATACCAGGAACAGAATCTGCAGAAAATCCTAGAGGCCTTATGGTTGAAGTGCACTGGGAACAAGATGATTCTGGTGCACTGTGCATTTCAGGTCACTCCCATGAAGTCCCGATCCCAGCAAATATTCAGCTACCGGCTGCACCACCTGTTACCCCTCGTAGAGGTTTCTTAGGTAGGACAAAGAAGATTTATGGCCTTGTTATTGATCCCGATCAGATTCCTGACACACTTTTCCGAAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_179932.p1 GENE.S_Transcript_179932~~S_Transcript_179932.p1 ORF type:complete len:969 (+),score=163.41,ABC_tran|PF00005.23|7.6e-23,ABC2_membrane_3|PF12698.3|2e-21,AAA_21|PF13304.2|0.25,AAA_21|PF13304.2|1.1e-09 S_Transcript_179932:180-3086(+)
MMELKRGIPLLVQQFRSLVVKNALLSWRHKLSTILQVFSSLVFIFLMFCIQRAVEAQFKGTTFFDNILDPKPLVSPSIPPCEDKFFIKKPCFDFVYSGNSSNNVNRLVARIMANNPGRIIPSSKVKSFGTEDEVDAWLLGNPMHCPGALHFIEENATVMSYGIQTNSTSVPMRGKYEDPTFKFQIPLQAAAEREIARFLIGDANFRWTVGFKEFAHPPADPFNVIGFIGPTFFFAMALFGFVFQMSSLVMEKELKLRQAMSMMGLYDTAYWLSWMTWEGFLVVISSIFIVLFGMMFQFDFFLHNSFAILFLVFFLFQLNMTAFAFALSAFVNKSASSTSIGFYSFIVGLVTQIVTVAGFPYSNTFSKTYRVIWSLFPPNLLAKALQMLTDATATNQDPGLSWKGRTKCAPNDDDCVLTMNDVLIWFVGTFFMWYVLAIYFENIIPNPYGVRKSVFYCLNPGYWTGKGKTKAQEGGICTCFGSSPHLEHITPEDEDVLEEENTVKGQVNEGAVDPNVAVQIRGLAKVYPGSTKLGCCKCKRTPPYHALRGLWVNLAKNQLFCLLGPNGAGKTTAINCLTGITPVTSGDALIYGHSVRSAVGMSNIRRMIGVCPQFDILWDVLTGQEHLRLFASIKGLPNATISTFIHNSLAQVRLTDAAKMRTSSYSGGMKRRLSVAIALIGDPKLIILDEPTTGMDPISRRHVWDIIEDAKQGRAIILTTHSMEEADILSDRIGIMAKGRLRCIGTSIRLKSRFGTGFVANVSFVGNVNGTPSNGDAIDTTSQEAVKHFFKLHLDVVPKEESRSFLTFFIPHEKEPLLTGFFEELQEREREFGIADIQLGLTTLEEVFLNIARQAEMESAASEGKLTTLNLTTSGTSVEIPTGARYVGIPGTESAENPRGLMVEVHWEQDDSGALCISGHSHEVPIPANIQLPAAPPVTPRRGFLGRTKKIYGLVIDPDQIPDTLFRR*

Click here to download the sequence:
Link to NCBI Protein BLAST