Transcript Information: S_Transcript_180011.p1


Annotated TAIR IDAT5G18730.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); BEST Arabidopsis thaliana protein match is: Domain of unknown function (DUF3444) (TAIR:AT5G18740.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:6247611-6249197 | Forward length=528
E-Value2E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0298051789544
Replicate 21.3088095500221
Replicate 30.93776624153901
Condition 2: 8 Hour
Replicate 12.5301310545751
Replicate 20.3791838752496
Replicate 32.3483560920742
Condition 3: 24 Hour
Replicate 12.5917658378671
Replicate 21.1523971987973
Replicate 31.068730695132


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_180011.p1 GENE.S_Transcript_180011~~S_Transcript_180011.p1 ORF type:5prime_partial len:118 (-),score=23.53,DUF3444|PF11926.4|1.2e-34 S_Transcript_180011:2-355(-)
GATGATGAAGATGGAATAGAGTGGTGCAATTCGGAGCTGCCTTATTCTTGTGGTCAGTTTAAGTTTGGTGATTCAGAGAACACCGAGGATCGTCTTATGTTCTCTCATGAGATATCTTGCATTAAGGGTACCGGTAGAGATTCTTTCAAGATATATCCCAGTAAGGGGGAGATTTGGGCCCTTTTCAAAAATTGGAATGCTAAATGGTACCTTGTTGCAGAAAATGAAAGGAAGTTTGAATATGAGTTTGTGGAAATACTGACTGAATATGATGAAACAACAGGTATCCGTGTTGCACCCTTGGGCAAGTTGAAGGGCTTTGTTTGTCTTTTTTTGTCGGAAAGGTGGAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_180011.p1 GENE.S_Transcript_180011~~S_Transcript_180011.p1 ORF type:5prime_partial len:118 (-),score=23.53,DUF3444|PF11926.4|1.2e-34 S_Transcript_180011:2-355(-)
DDEDGIEWCNSELPYSCGQFKFGDSENTEDRLMFSHEISCIKGTGRDSFKIYPSKGEIWALFKNWNAKWYLVAENERKFEYEFVEILTEYDETTGIRVAPLGKLKGFVCLFLSERWR*

Click here to download the sequence:
Link to NCBI Protein BLAST