Transcript Information: S_Transcript_180038.p1


Annotated TAIR IDAT1G59760.1
Annotated Gene NameRNA helicase, ATP-dependent, SK12/DOB1 protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:21984571-21990110 | Reverse length=988
E-Value1.4E-92
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.932688881947
Replicate 29.8633647433596
Replicate 37.1601210677508
Condition 2: 8 Hour
Replicate 111.917129883104
Replicate 215.133897609227
Replicate 313.040283240694
Condition 3: 24 Hour
Replicate 110.665443115996
Replicate 29.065524630539
Replicate 312.611022202558


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_180038.p1 GENE.S_Transcript_180038~~S_Transcript_180038.p1 ORF type:5prime_partial len:170 (-),score=52.61,DSHCT|PF08148.8|7.2e-45 S_Transcript_180038:490-999(-)
AAGGGGAAGGTTGCTTGTGAAATAAGTAGTGCTGATGAGTTGACATTGACAGAGCTTATGTTCAATGGTGTTTTCAAAGATATAAAAATAGAAGATATGGTGGCCCTTTTGTCTTGTCTTGTGTGGCAGGAGAAGCTTCAAGATGCTCAGAAGCCTAGAGAAGACCTTGAGCTGCTTTTTGCACAATTACAAGATACAGCAAGGAGGGTTGCCAAAGTTCAGCTTGAATGCAAGGTCCAAATTGATGTTGATAGCTTTGTGAGCTCATTCCGGCCTGATATCATGGAAGCAGTCTATGCTTGGGCCAAAGGATCCAAATTTTATGAGATCATGGAGATTTCACAGGTCTTTGAAGGTAGCTTGATCAGGGCCATCAGGAGATTGGAAGAAGTCCTTCAGCAACTCATTCTAGCAGCTCAATCTATTGGGGAGATTGAGCTCGAAGCTAAGTTTGAAGATGCTGTTTCCAAGATTAAGAGGTCTTCGCAGCATCACTGTACCTGTAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_180038.p1 GENE.S_Transcript_180038~~S_Transcript_180038.p1 ORF type:5prime_partial len:170 (-),score=52.61,DSHCT|PF08148.8|7.2e-45 S_Transcript_180038:490-999(-)
KGKVACEISSADELTLTELMFNGVFKDIKIEDMVALLSCLVWQEKLQDAQKPREDLELLFAQLQDTARRVAKVQLECKVQIDVDSFVSSFRPDIMEAVYAWAKGSKFYEIMEISQVFEGSLIRAIRRLEEVLQQLILAAQSIGEIELEAKFEDAVSKIKRSSQHHCTCN*

Click here to download the sequence:
Link to NCBI Protein BLAST