Transcript Information: S_Transcript_180055.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value1E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.9128658068357
Replicate 21.6739181131945
Replicate 32.2250564677976
Condition 2: 8 Hour
Replicate 11.4588264520427
Replicate 21.3634584369983
Replicate 30.90141644100667
Condition 3: 24 Hour
Replicate 12.6355145504821
Replicate 22.3396720905931
Replicate 31.4744229938314


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_180055.p1 GENE.S_Transcript_180055~~S_Transcript_180055.p1 ORF type:complete len:804 (+),score=157.44,RVT_1|PF00078.23|2.5e-26,zf-RVT|PF13966.2|9.2e-21,RVT_3|PF13456.2|3.9e+03,RVT_3|PF13456.2|3.5e+03,RVT_3|PF13456.2|2.4e-07 S_Transcript_180055:3600-6011(+)
ATGGTTATGATTAATGAAATTTTACATGTTATGAAGAAAAGTAAGGCTAAAGAAGGGCTGATGGCTATTAAGATTGATATGGCTAAGGCCTATGATAAGCTTGAATGGTCTTTCTTGACTAGTGTTCTTAGAGAGATGGGTTTCTCTGACAAAGTGGTGCATCTTATTGAACAATGTATTACTACCACTTCTTATTCTCTTTTGCTTAATGGGAGACCTTCTGGATTTAGAAGGCCACAAAGAGGGCTTAGACAAGGGGACCCCTTATCCCCCTTCCTCTTTGTGATTGCTATGGAGGCTATCTCTAGGCTTGCTCTTGATATGCAACAGAAAGGTTTATTACAGGGGATTTCTATTGACAAAAATTGCCAACCAATTACTCATCTGATGTATGCTGATGATTTGGTTATGTTTGCTAGAGCAAATGAATCAAATGCTATATCTATTAGACAAATTTTGCAGATTATGGAGGATTGGAGTGGTTTGGCAGCAAATAAGGGCAAGTCAGGCATCTACTTCAGTAACTGTACAAATGCTGTTAATAAAATGAAGGTCAAATCACATCTTCAATTCAACAAAATGAATAAGGACTCGGTCTATCTTGGCCTCCCTATGTTCAGATCAAAGAAGAAATGTGAGAGGTTTACTTTTGTCAAAGAAAGGGTTGAAAAGAAGATCCACTCTTGGAAGGCAAAATCTTTGTCTTTTGCAGCTAGGGCTACTCTTATTCAAGCAGTTGTTGGTACGATTCCTTCTTATGCAATGACTACTAATAATATTCCTAAGAAGGTGTGTTCTGCTATTGATGCAAAGTTGAGAGATTTCTGGTGGGGTTTTGATAAGGATAGGAAGGGGATTTATTTTAAGGCTTGGGACCAGATTTGTCGACCAAAGGCTCAAGGAGGTCTACAACTTAGGTTGATGAAAGACTTTAATGAGGCCTTACAAGCCAAGTTGTTCTGGCAGCTAGCTGCAGGGGAGAATAGAATCTGGGTACATCAGTTTAAAGAGAAGTATTGTCGGAGGTTTGGGGTGCTTAATGTTAAACCTTATCAAGGGAATTCTATCCAATGGAGAGAGATTCTGGGTGGTAGGATGGTTATTCAAAAGGGTATGTGTTACTTGGCTGGTGATGGCAAAGAGGTGAATATATGGACTGATCCCTGGGTTCCCAATATACCAGGGTTTAGACCAACTCAAAAGCAAGATGCTGAGATTACCTGTTTTAAAGTGGCTGACCTGATTGAAGGGGGTAGATGGAATGAAGAGTTAGTTAGAGCTCATTTTGAAAATACAGATGCTGAAGACATTCTGAGAATGGGTGTTGGGCAAGGTCCTGACCAAATTATTTGGACTCCTGAAGGTAAAGGCAACTTCACAGTAAAAAGTGCCTATAATTTGTTGTTACAAGGGAAGGAATTCAGTCAAGGGGAGTTTGAACCTAGTTTCTGGAGGAAAATTTGGAAATTAAATTTACCCTATAGATTGAGGATGTTCCTTTGGAGGGCAGCTGGGGACTGTTTACCACTCAAAGCTAACATAAAGAGTAGAATTCATGAGGCAGATGATTCTTGTGTTTTGTGTGGTACTGAAAGTGAATCTTTAACACACACTTTCTTTCTCTGTCAATTTTCCAGACTTCTTTGGTTCAAAATTCTTGGTCTGAGAACAGAATGTGGTGCTCAGTGGGGTAAGAAGCAGTGGTTGGAGACTTGTTTTAATGATGAATTTGTGAGCTTCCTAACAGGGTCCTCAAGAGAGGATGGTTTTAGACAATTCAGTATTTTGATGGATTGTATCTGGAGAGAAAGAAATAGGTGTTTACATGAGGGTGTGGCACCTGACCCAGAGCTCGTTTTTCAACAGTATTATAAATTCTGGGAGGAGGTCAAAGATATTAAAGGGGAGGGTGGAACTGCTACAAGTACCTCTCATCCTGTGGAGTTGGGGACTGGACCTTATTTTTGTACTGATGCTGCAGTTAGAGGTGGTTTCTCTCAGTGTGGTTGGGTGAGAGTTGATTCTCTGGGGGTTGTTGTTCAAGCAGAAACAAGGATTGCACATACTAAAATCCCTTTGGAGGCCGAATTACAGGGGATTTTGCTGCTGTGCAATTTTATCAGAGAGCATAATTTGGAGGGGGAAAGTATCTACAGTGATGCCAAAATTATTGTTGACCAATTGAAAAGGGGTCCCCCATTCCAATGGAGCATAAGAAGACAAATGGAGCTGCTTTGGCATGTTTTGCAGAAGACAGGGTGTTCAATTAACTTTATTCCTAGAAGATGTAATATGAATGCTCACAATTTAGTTGCTTGGTCTGTAGCTAAACATTTCTCTGGTTTCATTCCTCTTAGCAACTTGCATGAGGCTTGCACTTATTCTTCTGTAAATACCTTTACAAAGGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_180055.p1 GENE.S_Transcript_180055~~S_Transcript_180055.p1 ORF type:complete len:804 (+),score=157.44,RVT_1|PF00078.23|2.5e-26,zf-RVT|PF13966.2|9.2e-21,RVT_3|PF13456.2|3.9e+03,RVT_3|PF13456.2|3.5e+03,RVT_3|PF13456.2|2.4e-07 S_Transcript_180055:3600-6011(+)
MVMINEILHVMKKSKAKEGLMAIKIDMAKAYDKLEWSFLTSVLREMGFSDKVVHLIEQCITTTSYSLLLNGRPSGFRRPQRGLRQGDPLSPFLFVIAMEAISRLALDMQQKGLLQGISIDKNCQPITHLMYADDLVMFARANESNAISIRQILQIMEDWSGLAANKGKSGIYFSNCTNAVNKMKVKSHLQFNKMNKDSVYLGLPMFRSKKKCERFTFVKERVEKKIHSWKAKSLSFAARATLIQAVVGTIPSYAMTTNNIPKKVCSAIDAKLRDFWWGFDKDRKGIYFKAWDQICRPKAQGGLQLRLMKDFNEALQAKLFWQLAAGENRIWVHQFKEKYCRRFGVLNVKPYQGNSIQWREILGGRMVIQKGMCYLAGDGKEVNIWTDPWVPNIPGFRPTQKQDAEITCFKVADLIEGGRWNEELVRAHFENTDAEDILRMGVGQGPDQIIWTPEGKGNFTVKSAYNLLLQGKEFSQGEFEPSFWRKIWKLNLPYRLRMFLWRAAGDCLPLKANIKSRIHEADDSCVLCGTESESLTHTFFLCQFSRLLWFKILGLRTECGAQWGKKQWLETCFNDEFVSFLTGSSREDGFRQFSILMDCIWRERNRCLHEGVAPDPELVFQQYYKFWEEVKDIKGEGGTATSTSHPVELGTGPYFCTDAAVRGGFSQCGWVRVDSLGVVVQAETRIAHTKIPLEAELQGILLLCNFIREHNLEGESIYSDAKIIVDQLKRGPPFQWSIRRQMELLWHVLQKTGCSINFIPRRCNMNAHNLVAWSVAKHFSGFIPLSNLHEACTYSSVNTFTKE*

Click here to download the sequence:
Link to NCBI Protein BLAST