Transcript Information: S_Transcript_180055.p3


Annotated TAIR IDAT5G36228.1
Annotated Gene Namenucleic acid binding;zinc ion binding
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:14271691-14272776 | Forward length=361
E-Value1E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1726035026995
Replicate 21.4370399328649
Replicate 31.8372074259525
Condition 2: 8 Hour
Replicate 11.3073036209737
Replicate 21.2000225323991
Replicate 30.61252435646498
Condition 3: 24 Hour
Replicate 11.7157858680352
Replicate 21.6064387515802
Replicate 31.1596342255226


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_180055.p3 GENE.S_Transcript_180055~~S_Transcript_180055.p3 ORF type:complete len:522 (+),score=102.98,DUF4283|PF14111.2|1.2e-23,zf-CCHC_4|PF14392.2|1.2e-09 S_Transcript_180055:379-1944(+)
ATGGAAGCTTCGAAAATTGCTGATGGTAAAGAAGGGAGACAAACAACTATGGAGCTAAATGAACAGTTGGGGAATAAGCTTCTAGCTAATAGAATCCAGGAGTCTGATCTGGAAGATGATGACCTTACCCTTCCTTCAGACCCAGCTCTTCAGAAAAAAGTTTCCTCTCGGTGCTTAGTTGGGAAGATGATTTCTGATACAGGGGTCAAAACAGCTCTTGCAAGATCTATTATGGAGAAGTACTGGCACTTACAAGGTAACCCAAAAATTTCTATTTTGGATGAATCTAAGTTTTTGTATACATTTCCAGACCTCATAAGTAGGGATAAAACTTTTGAATATGGTACTTGGTGTGCTCTGGGAAAGTTAGTGGTTATGAAAAAATGGGATGAAGGGCAGCAGATAGAGGACCTGGATTTTACAAAAACATCACTATGGCTACAAATTCATGGCCTTCCTTGGGACAAACTCTCGGAACAAAACGCGATTACTATTGGGAACAAATTTGGAAGGGTCTTGGCTGTCGACCAGGTAACGGAGGATAGATTGCTTGCCCGTAGATTTTTGAGGGTAAAGGTGGAACTGGATGTTACAAACCCTTTGCCTCGAGGTCGTTTCTTTAAAGATAATGGCCAAAGAAAGTGGTTGTCTGTTAAAATTGAAAGGATCTCTGATTACTGTTATGACTGTGGTAGGCTGGGACATGAGAAATTGCACTGTCCGTTTGGCAAGCCTTTATCCACTCTGCCTGATAGGGGATATATTGTGAATCTTAGAGCACTGGACCTTCTGGACTGGAATGCCCCTTGTAAAGTGGTTACTACGGAGGAAGATTACCCTGAACCTGCACCTCTTCAGATTGCTGCTCCGAACCATTGTAGCCCTCAACTGCCAGAAGGGAACGGGTGTCCCTTGGGAAAGGTTTCAGAGTATCTTTCTCAGGCTTCAACAGGATCTTTTGTTTCCAATATTTCGAAAAGTGTGGAGGTGTCACAAGTTGAAGAGACTCAAGAGGGGTACTACTTGAATGCTCATTCTGTCCCAGTATTGAACCCCAAGGTATTCGCTAGTGATGCTACGCGAAACAGGCCACAAGTCAGAAGAAAATTGGCAGACAAAGGGAAAGGAAAATTGGTAGAGGTACCCAAGACTCCAGAGCCTATAGCCTTGAAAGGGGTCTTCATTAGGGAGCCCTCGGAGCAAAAAGGAAGTAAAAATCCTGTTTTAAGCAAGGCTTTAGAGCAGTTATCTCTTAAGAGGAAGGATACTAGGTCTCTTTTTCAGCTGCAGGGAAAGGATGTTAAAAATAGAAAAGTGGATGTTGGCTTTGACGAATTGATGGGTATGGATAAGGATGATATTAGGTTCTCCTTAGGTGATGTCAGGAGAGCTAAAAGAGATACTTTTGCTCCAAAATCTCGGAGACTTCAGTTCGACCGGAGTTCCAAGGAAATTATAGAAGAGGTGTCTGATAATGCCCTGACTACTGCAATGTATGAATTTGAAAATTATGTTTCTGAGGCTGAGGAGGCGAGCCCAATCAAGCCCCCATCCCCCCAATGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_180055.p3 GENE.S_Transcript_180055~~S_Transcript_180055.p3 ORF type:complete len:522 (+),score=102.98,DUF4283|PF14111.2|1.2e-23,zf-CCHC_4|PF14392.2|1.2e-09 S_Transcript_180055:379-1944(+)
MEASKIADGKEGRQTTMELNEQLGNKLLANRIQESDLEDDDLTLPSDPALQKKVSSRCLVGKMISDTGVKTALARSIMEKYWHLQGNPKISILDESKFLYTFPDLISRDKTFEYGTWCALGKLVVMKKWDEGQQIEDLDFTKTSLWLQIHGLPWDKLSEQNAITIGNKFGRVLAVDQVTEDRLLARRFLRVKVELDVTNPLPRGRFFKDNGQRKWLSVKIERISDYCYDCGRLGHEKLHCPFGKPLSTLPDRGYIVNLRALDLLDWNAPCKVVTTEEDYPEPAPLQIAAPNHCSPQLPEGNGCPLGKVSEYLSQASTGSFVSNISKSVEVSQVEETQEGYYLNAHSVPVLNPKVFASDATRNRPQVRRKLADKGKGKLVEVPKTPEPIALKGVFIREPSEQKGSKNPVLSKALEQLSLKRKDTRSLFQLQGKDVKNRKVDVGFDELMGMDKDDIRFSLGDVRRAKRDTFAPKSRRLQFDRSSKEIIEEVSDNALTTAMYEFENYVSEAEEASPIKPPSPQC*

Click here to download the sequence:
Link to NCBI Protein BLAST