Transcript Information: S_Transcript_180062.p1


Annotated TAIR IDAT4G29090.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14333528-14335255 | Forward length=575
E-Value3E-37
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.280625623347
Replicate 21.2939079590122
Replicate 31.3589384482653
Condition 2: 8 Hour
Replicate 11.1544572201756
Replicate 21.2111075955341
Replicate 31.2821562469162
Condition 3: 24 Hour
Replicate 11.4782251986116
Replicate 21.4995604652019
Replicate 31.8584664298507


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_180062.p1 GENE.S_Transcript_180062~~S_Transcript_180062.p1 ORF type:complete len:665 (-),score=119.98,zf-RVT|PF13966.2|6.6e-19,RVT_1|PF00078.23|1.2e-05 S_Transcript_180062:141-2135(-)
ATGGAGGCTATATCTAGACTAGCTATAGACAAACAAGAGAAAGGTTTGCTACAGGGGATTTCTATTGATAAAAATTGCCAACCAATTTCTCACCTTATGTATGCAGATGATTTGGTTATGTTTGCTAGAGCAAATGAAGAAAATGCAATTGCTATTGCTGATATTTTGCAGACTATGGAGGAATGGAGTGGCCTAGCAGCCAATAAGGCCAAGTCAGGTATTTTCTTCAGCAGCTGCACTAAAGCAGTCAACAAAATGAAGGTTAAATCTCACCTTCACTTTAATAAAATGAGTAAAGACTCGGTTTATCTTGGTTTACCTTTGTTTAGAACCAGGAAGAAGTGTGAAAGATTTACCTTTATCAAAGAACGGGTGGAGAAGAAGATTCAGACTTGGAAGGCCAAAGCTCTATCCTTTGCTGCTAGGGCTACTCTTATCCAAGCAGTAGCTGGTACTTTACCCTCTTATGCTATGACAACCAACAATTTACCCAAGAAGGTGTGTACTGATATTGATGCTAAACTTAGAGATTTTTGGTGGGGATTTGATAAAGATAGGAAAGGGATTTATTTCAAGGCTTGGGAGCAGATTTGCAGGCCAAAAGTTGAAGGAGGCTTACAGCTAAGATTGATGAAGGACTTCAATGAGGCATTACAAGCCAAACTTTTCTGGCAATTGGCCTTAGGGGAAAGTAGAATGTGGATTAATCAATTCAAAGACAAGTATTGTAGGAGATTTGGAGTGCTTAATGTGGAACCTTGCCAGGGGGATTCTATCCAATGGAGAGAATTACTGGGAGCTAGGAGGATTATTAAGAGGGGTTGTTGCTTTCTAATTGGGGATGGAAAAACGGTCAATATTTGGACTGATCCTTGGGTTCCCAATATTCCAGGCTTTAGACCAAGACAAAAACAAGATGCTGATATTACTTGTTTCCAGGTGGCAGATTTATTGGAGGGAGGTACATGGAATGAGGAGCTGGTTAAATCTCATTTTGAAGAACAAGATGCTGCTGAAATATTGAACTTAAGTGTAGGGAATGAACCAGATCAACTCATATGGACCCCTGAAACAAAAGGTAATTTTACAGTTAGTAGTGCTTATAAACTGGTTCTACAAGGGAAGGATCTTGATCAAGGGGAGTTTGAGCCATGTTTTTGGAAAAAGGTCTGGAAGATGCAAGTGCCCTATAGAATGAGAATGTTTTTATGGAGAGCAGCTGCAGGTTGTTTGCCACTCAGGGCTAATATAAAGAACAAAATACATGAAGCAGATGATTCCTGTGTTTTGTGTGGATGTGGAAGTGAATCATTCACCCATACCTTTTTCCTTTGTCTTTTTTCAAGGATGATTTGGTTTATAGTTTTTGGCCTGAGGACTGATTGTGGTTCCCATTGGGACAGCAAACAATGGTTGGAGCAATGTTTTAATAATAACTTGTTTGCTCAACAAGCAGGGTTATCTTCAAACAATGGTCACCGCAAGGTATGTATTATGATGGACTGTATCTGGAGGGAACGGAATAGATGCTTGCATGAGCATAAACAGCCTGATGTGGATTTGGTGGTAACTCAGTTTTTCAAACTTTGGAATGAAGTCTTAGGCCTCAAGAGGGAAGATGGGATTACAGTAAACCAATACCAGGCAGATCTGGTTTCTGGCCCCTATTTTTGTACAGATGCAGCTGTTAGAGGTGGGAGCGTGTTTTGTGGTTGGGTGCGAAGAGACATTTATGGGGTTGTCACAAAAGCAGAAGTAATGTTAGCAAGTACTAGCTCCCCCCTTGAGGCTGAGTTGGAAGGGATTTTGTTGGTTTGCAAATTCATTAGAAAGGATGATTTAAGGGGACAAAGAATTTTCAGCGATGCAAAGATTATCACTGATCAACTGCAAAAGGGTCCCCCTTCCAATGGATTATCAGAAGAAATATGGAGGTGGTGTGGAAGATTTTGCAGGAGCAGAGCTGCACAATTAATTTCATCCCGAGGGACTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_180062.p1 GENE.S_Transcript_180062~~S_Transcript_180062.p1 ORF type:complete len:665 (-),score=119.98,zf-RVT|PF13966.2|6.6e-19,RVT_1|PF00078.23|1.2e-05 S_Transcript_180062:141-2135(-)
MEAISRLAIDKQEKGLLQGISIDKNCQPISHLMYADDLVMFARANEENAIAIADILQTMEEWSGLAANKAKSGIFFSSCTKAVNKMKVKSHLHFNKMSKDSVYLGLPLFRTRKKCERFTFIKERVEKKIQTWKAKALSFAARATLIQAVAGTLPSYAMTTNNLPKKVCTDIDAKLRDFWWGFDKDRKGIYFKAWEQICRPKVEGGLQLRLMKDFNEALQAKLFWQLALGESRMWINQFKDKYCRRFGVLNVEPCQGDSIQWRELLGARRIIKRGCCFLIGDGKTVNIWTDPWVPNIPGFRPRQKQDADITCFQVADLLEGGTWNEELVKSHFEEQDAAEILNLSVGNEPDQLIWTPETKGNFTVSSAYKLVLQGKDLDQGEFEPCFWKKVWKMQVPYRMRMFLWRAAAGCLPLRANIKNKIHEADDSCVLCGCGSESFTHTFFLCLFSRMIWFIVFGLRTDCGSHWDSKQWLEQCFNNNLFAQQAGLSSNNGHRKVCIMMDCIWRERNRCLHEHKQPDVDLVVTQFFKLWNEVLGLKREDGITVNQYQADLVSGPYFCTDAAVRGGSVFCGWVRRDIYGVVTKAEVMLASTSSPLEAELEGILLVCKFIRKDDLRGQRIFSDAKIITDQLQKGPPSNGLSEEIWRWCGRFCRSRAAQLISSRGT*

Click here to download the sequence:
Link to NCBI Protein BLAST