Transcript Information: S_Transcript_180194.p1


Annotated TAIR IDAT4G21500.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G05018.1); Has 20 Blast hits to 20 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11441065-11441712 | Reverse length=215
E-Value6E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.10245964490889
Condition 2: 8 Hour
Replicate 10.47389756260296
Replicate 20.062144023999241
Replicate 30.29605343895807
Condition 3: 24 Hour
Replicate 10
Replicate 20.18886509646956
Replicate 30.14012246891731


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_180194.p1 GENE.S_Transcript_180194~~S_Transcript_180194.p1 ORF type:3prime_partial len:360 (+),score=50.26 S_Transcript_180194:281-1357(+)
ATGTCAACATTCTCCCTTCCTTCTTCAAACCCTCTTTTTTCTACAACTGTCACTCTTTATATGCTCATTCTCCTCTATTTTCCACATTTCTTTCTTAAACTCATTTTCTCCCCTCTTTTTATCTCCACTTTCATTGTCCTCCTTTCCCTCCTCAGGTTTGGCGCCTCCCAACAATTCAAACCTCCTGGTCGGGCCGCACCTGGACCGTCATTTGAGCCCGACCCAGGTCCCAGGCCCGAGCACAAAACAGTGAGTCTTGATCAGGAACAAAGCAACTTGGTCGAAACCCAACTCTCGGCTGCGCCAGGCCCGGAACCCGGGCCCAAAAAGAATGATGAGGGCATTGAAGAAACTGACTCCCACCCAGAGGAAGAAGATGAAGGAGCAGAGGAGCATTGGGGCTGGTCCTCGACCGAGCCTGAACCCGAGCTCAAAAGCGAGGCCCACCTGGAACCGTTTGGCTGGGCCCAGAACCATGGCCCCGGCCCGAAGAGTTACTTAGAGTGGGAATTTGGGCCCAGAACCAAGTATGACGAGGGCATGAAAGAAAATGAGACCCACCAAGAGAAACAAGTAGTAGTAGATGTACATCCGGGCCGGGTTTCAGGTCGACCCGATACCAGGCCCGAGATCGGAAGCGAGGCCGAGCAGGAACCGGCTGGCCAGGACCAGAATCATGGTCGCGACCCGAACGTGTACTATTGCGGGAAGGGTTTCCCAGAGTGGGAATTTGGCGCGCCGCTAGAGGTGATATACGAGGCGTACGAGGGGGAGGAGGAAGGAGTGGAGAGCCAAAACGATGCGTTTCATGAAGAGAATTATAACAACATGGCTAAATTAATGTTGGACAAATACCCATCGTTGTCAAAGTATTACCCAGAATCAGAATCGGATTCCGAGAGTTGTTCGTCATGGTCGTCGGATGATGATCATCAAGAGGAGAGAGAAGAGTTGATTGAGATTGCTTTGGATTATCATCGTGGTAGTGATATTAATAATAAGGAGGTGAAAAATTTAGTAAAGGAGGTTGATGTTGAGGAGGAGGATAATTTGATTGAGATTGATATTTCTCCTACT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_180194.p1 GENE.S_Transcript_180194~~S_Transcript_180194.p1 ORF type:3prime_partial len:360 (+),score=50.26 S_Transcript_180194:281-1357(+)
MSTFSLPSSNPLFSTTVTLYMLILLYFPHFFLKLIFSPLFISTFIVLLSLLRFGASQQFKPPGRAAPGPSFEPDPGPRPEHKTVSLDQEQSNLVETQLSAAPGPEPGPKKNDEGIEETDSHPEEEDEGAEEHWGWSSTEPEPELKSEAHLEPFGWAQNHGPGPKSYLEWEFGPRTKYDEGMKENETHQEKQVVVDVHPGRVSGRPDTRPEIGSEAEQEPAGQDQNHGRDPNVYYCGKGFPEWEFGAPLEVIYEAYEGEEEGVESQNDAFHEENYNNMAKLMLDKYPSLSKYYPESESDSESCSSWSSDDDHQEEREELIEIALDYHRGSDINNKEVKNLVKEVDVEEEDNLIEIDISPT

Click here to download the sequence:
Link to NCBI Protein BLAST