Transcript Information: S_Transcript_180195.p1


Annotated TAIR IDAT4G21500.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G05018.1); Has 20 Blast hits to 20 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 17; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:11441065-11441712 | Reverse length=215
E-Value9.2E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.79119733401888
Replicate 20.59629160966256
Replicate 30.59814279190056
Condition 2: 8 Hour
Replicate 11.4985409412039
Replicate 20.96743129252872
Replicate 30.92176638291811
Condition 3: 24 Hour
Replicate 10.35424135390153
Replicate 20.12250708960188
Replicate 30.47717381306976


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_180195.p1 GENE.S_Transcript_180195~~S_Transcript_180195.p1 ORF type:3prime_partial len:370 (+),score=53.66 S_Transcript_180195:281-1387(+)
ATGTCAACATTCTCCCTTCCTTCTTCAAACCCTCTTTTTTCTACAACTGTCACTCTTTATATGCTCATTCTCCTCTATTTTCCACATTTCTTTCTTAAACTCATTTTCTCCCCTCTTTTTATCTCCACTTTCATTGTCCTCCTTTCCCTCCTCAGGTTTGGCGCCTCCCAACAACTCACTCCTGGTCGGGCCGAACCTGGGCCGTCATTTAAGCCCGACCCGGGTCCCAGGCCCGAGTGCAAAACAGTGAGTCTTGATCAGGAACAAAGCAACTTGGTCGAAATCCAACCCCCGGATGAGCCCGGCCTAGAACCCCGTCCCAAAAACTATGATGAGGGCATTAAAGAAACTGACACCCACCAAGAGGAAGAAGATGAAGGAGCAGAAGAACATTCTGAGCGGGCCTTGACTGAGCCCGTTATCAGGCCCGAGGATAATCCCGAGCTCGAAAGCGAGGCCCAGCTGGAACCGTTTGGTCGGGCCCAGAACCATGGTCCCGACCCGAACATGTATTGCCGGAAGGGTTACTTAGAGTGGGAATTTGGGCCCAGAACCAAGTATGACGAGGGCATTAAAGAAAATGAGACCCACCAAGAGAAACAAGTAGTAGTAGATGTACATCCGGGCCGGGTTTCAGGTCGACCCGATACCAGGCCCGAGATCGGAAGCGAGGCCGAGCAGGAACCGGCTGGCCAGGACCAGAATCATGGTCGCGACCCGAACGTGTACTATTGCGGGAAGGGTTTCCCAGAGTGGGAATTTGGCGCGCCGCTAGAGGTGATATACGAGGCGTACGAGGGGGAGGAGGAAGGAGTGGAGAGCCAAAACGATGCGTTTCATGAAGAGAATTATAACAACATGGCTAAATTAATGTTGGACAAATACCCATCGTTGTCAAAGTATTACCCGGAATCAGAATCGGATTCGGAGAGTTGTTCGTCATGGTCGTTGGATGATGATCATCAAGAGGAAAGAGAGGAGTTGATTGAGATTGCTTTGGATTATCATGGTGGTAGTGATATTAGTAATAAGGAGGTGAAAAATTTAGTAAAGGAGGTTGATGTTGAGGAGGAGGATAATTTGATTGAGATTGATATTTCTCCTACT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_180195.p1 GENE.S_Transcript_180195~~S_Transcript_180195.p1 ORF type:3prime_partial len:370 (+),score=53.66 S_Transcript_180195:281-1387(+)
MSTFSLPSSNPLFSTTVTLYMLILLYFPHFFLKLIFSPLFISTFIVLLSLLRFGASQQLTPGRAEPGPSFKPDPGPRPECKTVSLDQEQSNLVEIQPPDEPGLEPRPKNYDEGIKETDTHQEEEDEGAEEHSERALTEPVIRPEDNPELESEAQLEPFGRAQNHGPDPNMYCRKGYLEWEFGPRTKYDEGIKENETHQEKQVVVDVHPGRVSGRPDTRPEIGSEAEQEPAGQDQNHGRDPNVYYCGKGFPEWEFGAPLEVIYEAYEGEEEGVESQNDAFHEENYNNMAKLMLDKYPSLSKYYPESESDSESCSSWSLDDDHQEEREELIEIALDYHGGSDISNKEVKNLVKEVDVEEEDNLIEIDISPT

Click here to download the sequence:
Link to NCBI Protein BLAST