Transcript Information: S_Transcript_180207.p1


Annotated TAIR IDAT5G07420.1
Annotated Gene NamePectin lyase-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:2349547-2351366 | Forward length=361
E-Value2E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.55443752573293
Replicate 20.22982072455745
Replicate 30.28816775130626
Condition 2: 8 Hour
Replicate 10.3332092237052
Replicate 20.23304008999715
Replicate 30.44408015843711
Condition 3: 24 Hour
Replicate 10
Replicate 20.11804068529348
Replicate 30.13136481460998


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_180207.p1 GENE.S_Transcript_180207~~S_Transcript_180207.p1 ORF type:5prime_partial len:192 (+),score=9.12,Pectinesterase|PF01095.15|1.1e-14 S_Transcript_180207:2-577(+)
TTGGATGTTACCTATATAGTTATATATATACTCTATGCACAATTGCACATCTTCCATCATCCAACAATAATAAAAAAAAATCTCATGGCTTCGGCCAAGCACCAATTTCTACCTTTTCTTTTGCCCCTCTTATTTCTTTTAGTACCCCAACTTTCATGGGGTAGTAAAGCTACTGATTCACAACAAGATTATGAGAAATGGCTAATGTGGAATGTCCAAAATCACCATTGGAGAAGGACTACTCTTATTGCTGATCAATCAAAGGTGGCGCCATCTCGAAATACTTCTACAAAGATTTTAGATTTGAAGCTTGAAAATGCAGAGATTAACAAGATAAGGATAATTGTGAATCAAGATGGCATAGGAGATTACAAAACTATTGCCGATGCCCTCAACAGTATTCCACTACATAATACTAAGAGAGTTATCTTAGATATTAAGCCTGGTGTGTACAGGGAAAAAATACACATCCCTAAAACAAAGCCATTCATTACATTGTTGGGAGACCCGGGAAACCCACCAACCATCACGGGAAATTACACGGCCTCTATCATCCGAGGAGATGGCACGCGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_180207.p1 GENE.S_Transcript_180207~~S_Transcript_180207.p1 ORF type:5prime_partial len:192 (+),score=9.12,Pectinesterase|PF01095.15|1.1e-14 S_Transcript_180207:2-577(+)
LDVTYIVIYILYAQLHIFHHPTIIKKNLMASAKHQFLPFLLPLLFLLVPQLSWGSKATDSQQDYEKWLMWNVQNHHWRRTTLIADQSKVAPSRNTSTKILDLKLENAEINKIRIIVNQDGIGDYKTIADALNSIPLHNTKRVILDIKPGVYREKIHIPKTKPFITLLGDPGNPPTITGNYTASIIRGDGTR*

Click here to download the sequence:
Link to NCBI Protein BLAST