Transcript Information: S_Transcript_180316.p1


Annotated TAIR IDAT5G17230.3
Annotated Gene NamePHYTOENE SYNTHASE
Annotated Gene Symbol(s)PSY
Annotation TypeOrtholog
Chromosome Positionchr5:5659839-5662087 | Reverse length=437
E-Value9E-83
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.097483521007987
Replicate 20
Replicate 30.13511161966008
Condition 2: 8 Hour
Replicate 10.46868989707985
Replicate 20.32779265406193
Replicate 30.3123201114283
Condition 3: 24 Hour
Replicate 10
Replicate 20.083017624821785
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_180316.p1 GENE.S_Transcript_180316~~S_Transcript_180316.p1 ORF type:complete len:273 (+),score=44.31,SQS_PSY|PF00494.15|6.3e-43 S_Transcript_180316:65-883(+)
ATGGGTCTGTTTGTCTTGCAGGCGCCAAATCCAGTAACTGATGTCAGTAATCTGCATATTAAGTTGTTATTTTCCATGAAAAGATCCAAGTTCAGTGTAACCAATGCAAGAACAAAACTAGTATCAAGTACACCTACCTCTGTGGTTTTGTCAAAAAAGGGGAATGGTCCATCTCCATTACTTGATTTACATGTTCAGCATGCAATTGAGAAGCAGTCCAAAGATGCAATGACTCTAAGAAAAGGCCATCAGTTAGATCCTTGTTTTCTTGGGGAGGCCTATGAACGGTGTCGCAAAATATGCGCTGAATATGCCAAGACTTTCTATTTAGGAACTTTACTTATGACGGAGGAAAGAAAGAGAGCAATATGGGCTCTCTATGTTTGGTGTCGTAGAACGGATGAGCTAGTGGATGGTCCAAATGCTCAACTAACTAGCTCCACTGTGCTGGATAGTTGGGAAGAGAGACTTGATAACATCTTCAATGGATGCCCTTATGACATGCTTGATTCTGCCTTGCTACATACTATTCAAACATTTCACCTTGACATTAGGCCATTCAGAGACATGATCGAAGGGATGAGAATGGATATGTGGAAAGACCGCTATGACAGCTTTGAAGAGCTACGCCGTTACTGCTTTTATGTGGCTGGCACTGTTGGGCTAATGACTGTCCCAATTTTGGGCATTTCTCCTGAATCTCTACCTGACACCGAAAGCATCTATAATGCTGCCATTTGCTTGGGAATTGGAAATCAACTAACAAACATCCTTAGAGATGTAGGAGAAGATTTCAGCTTCTTCAATTCAGTGCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_180316.p1 GENE.S_Transcript_180316~~S_Transcript_180316.p1 ORF type:complete len:273 (+),score=44.31,SQS_PSY|PF00494.15|6.3e-43 S_Transcript_180316:65-883(+)
MGLFVLQAPNPVTDVSNLHIKLLFSMKRSKFSVTNARTKLVSSTPTSVVLSKKGNGPSPLLDLHVQHAIEKQSKDAMTLRKGHQLDPCFLGEAYERCRKICAEYAKTFYLGTLLMTEERKRAIWALYVWCRRTDELVDGPNAQLTSSTVLDSWEERLDNIFNGCPYDMLDSALLHTIQTFHLDIRPFRDMIEGMRMDMWKDRYDSFEELRRYCFYVAGTVGLMTVPILGISPESLPDTESIYNAAICLGIGNQLTNILRDVGEDFSFFNSVL*

Click here to download the sequence:
Link to NCBI Protein BLAST