Transcript Information: S_Transcript_180401.p2


Annotated TAIR IDAT4G13320.1
Annotated Gene Nameunknown protein; Has 68 Blast hits to 67 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 68; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:7753436-7754086 | Forward length=216
E-Value1E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.18481250857764
Replicate 20.34473108683617
Replicate 30.41624230744237
Condition 2: 8 Hour
Replicate 10.037023247078356
Replicate 20.038840014999525
Replicate 30
Condition 3: 24 Hour
Replicate 10.9481286237237
Replicate 20.90497858724998
Replicate 30.4378827153666


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_180401.p2 GENE.S_Transcript_180401~~S_Transcript_180401.p2 ORF type:complete len:576 (+),score=130.51,Retrotrans_gag|PF03732.13|3.5e+03,Retrotrans_gag|PF03732.13|2e-14,Asp_protease_2|PF13650.2|1.6e-07,gag-asp_proteas|PF13975.2|4.6e-07 S_Transcript_180401:307-2034(+)
ATGGCGGGACGTGGCAATGGAGGTTTTAGAATGGGTATGACCTTTGAAGAGGCAAGGGAAGCAAGGAGAGATGCCCAAATATCCGACCTCCAAGAGCAAATGCAAAAAGTGCTAAGAGCCCTAGAAAGTCTCGCAATACCTCATGGTGGACGAGGTGGAGGTTCTACTCCTTCTTCTAGTGGAGAATCTGAAAATGGAGACACACCCCCTCCACCTAGGCATAGGAGGCCCAAGAAGGATGATCTAAGAGACATCAAACTCGAGGCTCCAGATTTTGAAGGTGGTGGTGAGCCTAGTGACTATATCGAGTGGGTTCTCAACATTGAGAGGGTTTTTGAGGCCAAGGCGTTTGATGATGAGAAGAGCTACAAACTAGCCTCCACAAAACTCAAGAGGTATGCTTCTTTGTGGCTTGACAATACCCAAAAGCTTCGGCTTAGGGAAGGGAAAGCCAAGATTAAAACATGGTCCAAACTCAAATCTCTCATGAACAAGCGGTTCATTCCTGAATCTTACAAACAAGACCTTTATCTTGAGCTCACCCAACTTAAACAAGGCCAATCAAGTGTGAGTGAGTATGTGAGAGCTTTTGAACAACTACAAATGAGAACCGGTTTGCTTGAGGCTCAAGAACACACCATAGCCGGGTTTGTGGCTGGATTGGATAAGAATGTGGCGGATAGGGTAGAGCTTCAACCCTTATGGACTCTTCAAGACGCTATTAAGTTGGCCTTAAAAGTGGAGAAACAACTTAAAGGAAAGAGGGAGTCTAAATCTCCTTATGTCAATCCTTTTGGCTCGGCCAAAGGGGGTCAAGGTTCTTCTAAGAGTTTTGTTCCTAATGCATCTAGCAAAGGCAAGGAGATTGTGCCTAGCAACTCGTCTTCCTCACCCAAGGGTAAAAGGTGCTATAAGTGTCAAGGTTATGGCCATTTTGCAGCCCAATGTCCTAATAGAAGAGCTTTAACTTTACAAGAGATTGAGGAGATGCAAGGGGATATTGAAACCGAACCCGAGTGTGGGGGTGAGCAACCTATCTATGATGATGGAGGTGAGGCTATACTTGGGCCGGATGTTGGAGAAATGTTGATGGTTCGAAGACTCTTACATTCAAAGGAGGGACCGAAAGATCACACACAAAGAGAGAACATCTTCCATACAAGATGTACCATTCAAGGCAAGGTGTGTTCTATGATTGTTGATGGGGGAAGTTGTGCCAATGCCGCCTCCACCACCCTTGTCGAAAAGCTTGGATTGTCCACCACCAAGCATCCTAATCCCTACAAACTCCAATGGCTCAACAAAGGTAATGAGGTAAAGGTCATTAAACAAGTCACTATTCCTTTCTCCATTGGGAATACTTATAGAGATGAGGTTGTGTGTGATGTGGTGCCTATGGATGCTTGCCATGTATTATTGGGTAGGCCTTGGATGTATGATAGGTATGTTTGGCATAATGGTAGAGCTAATACCTACTCCTTGTTTGTGGGTGGAAAGAAGATTGTCCTAACTTCCCTAGAACCTAAAGACCTAATCGGTCCTAATGATCGAGTGAAGACTATGTACATGGGTAAAGGGGAATTGTGTGATGTGTTTGCTACTTGTGGTAATGTGTTGGCATTAGTTGTTTTGGAGGAAAATGAGACCCATGGGGTGACCGGATTGCCTAGTGAGGTGAAGCCCCTTTTGAGTGAGTTTGTTGATGTGTTCCCTAGTGAGTTACCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_180401.p2 GENE.S_Transcript_180401~~S_Transcript_180401.p2 ORF type:complete len:576 (+),score=130.51,Retrotrans_gag|PF03732.13|3.5e+03,Retrotrans_gag|PF03732.13|2e-14,Asp_protease_2|PF13650.2|1.6e-07,gag-asp_proteas|PF13975.2|4.6e-07 S_Transcript_180401:307-2034(+)
MAGRGNGGFRMGMTFEEAREARRDAQISDLQEQMQKVLRALESLAIPHGGRGGGSTPSSSGESENGDTPPPPRHRRPKKDDLRDIKLEAPDFEGGGEPSDYIEWVLNIERVFEAKAFDDEKSYKLASTKLKRYASLWLDNTQKLRLREGKAKIKTWSKLKSLMNKRFIPESYKQDLYLELTQLKQGQSSVSEYVRAFEQLQMRTGLLEAQEHTIAGFVAGLDKNVADRVELQPLWTLQDAIKLALKVEKQLKGKRESKSPYVNPFGSAKGGQGSSKSFVPNASSKGKEIVPSNSSSSPKGKRCYKCQGYGHFAAQCPNRRALTLQEIEEMQGDIETEPECGGEQPIYDDGGEAILGPDVGEMLMVRRLLHSKEGPKDHTQRENIFHTRCTIQGKVCSMIVDGGSCANAASTTLVEKLGLSTTKHPNPYKLQWLNKGNEVKVIKQVTIPFSIGNTYRDEVVCDVVPMDACHVLLGRPWMYDRYVWHNGRANTYSLFVGGKKIVLTSLEPKDLIGPNDRVKTMYMGKGELCDVFATCGNVLALVVLEENETHGVTGLPSEVKPLLSEFVDVFPSELP*

Click here to download the sequence:
Link to NCBI Protein BLAST