Transcript Information: S_Transcript_180406.p1


Annotated TAIR IDATMG00860.1
Annotated Gene NameDNA/RNA polymerases superfamily protein
Annotated Gene Symbol(s)ORF158
Annotation TypeHomolog
Chromosome PositionchrM:235916-236392 | Forward length=158
E-Value7E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.034879424947812
Replicate 20.14457922383693
Replicate 30.048342689603147
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.05587378140231
Condition 3: 24 Hour
Replicate 10.22904202873493
Replicate 20.059407107670635
Replicate 30.066112829371209


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_180406.p1 GENE.S_Transcript_180406~~S_Transcript_180406.p1 ORF type:complete len:763 (-),score=146.64,RVT_1|PF00078.23|9.1e-35,zf-H2C2|PF09337.6|3.6e-07,rve|PF00665.22|7.2e-06 S_Transcript_180406:838-3126(-)
ATGAGGTTGTGTGATGTGGTACCTATGGATGCTTGCCATGTGTTGTTGGGTAGGCCTTGGATGTATGATAGGTATGTTTGGCATAATGGTAGGGCTAATACCTACTCTTTGTTTGTGGGTGGAAAGAAGATTGTCCTAACTTCCCTAGAACCTAAGGACATAATCGACCCTAGTGATCAATTGAAGACTATGTATATGGGTAAAGGGGAGTTGTGTGATGTATTTGCTTCTTGTGGTAATGTGTTGGCATTAGTTGTTGTGGAGGAGAATGAGACCCATGGGGTGGCCGAATTACCTAGTGAGGTGAAACCCCTTTTGGAGGAGTTTTGTGATGTGTTTCCTAGCGAGTTACCCCAAGGACTCCCACCTATTAGGGGAATAGAGCACCAAATTGACTTGATTCCGGGTTCTATTCTTCCTAACAAGCCCGCTTATAGATGTACCCCTGAGGAGTCTAGGGAGTTACAAAGGCAAGTGGATGAATTATTGGAGAGGGGCTATGTGAGGGCTAGCATGAGTCCATGTTCGATTCCCGCTTTGCTAGTACCCAAGAAAGATGGGTCTATGAGAATGTGTGTGGATAGTAGAGCTATTAACAACATCACCATCAAATATAGGTATCCTATCCCAAGGCTTGATGATATGCTTGATGAGCTTCATGGGGCTCAAGTGTTCTCCAAGATTGACCTTAGGAGTGGGTACCATCAAATCCGAATGAGGGCAGGAGATGAGTGGAAAACCGCTTTTAAGACTAAAGGGGGACTTTATGAATGGACTGTCATGCCATTTGGGTTATCCAATGCTCCTAGTACCTTCATGAGATTGATGAATGAGGTATTGCGCCCTTTCCTTGGTAAATTTGTTGTTGTTTATTTTGATGACATTTTGGTTTATTCTAAGGATGTTTGTAGCCATCTTAATCATTTGAGGCAAGTATTCAACACTTTGAGGCAACATCAAATCTATGCCAAGCTTGAGAAGTGTGAATTCATGTCTTCAAGTGTTACATTCTTGGGTTATGTGGTGTCAAGTCAAGGGATTTCTATGGATCCTAGTAAGGTTGAAGCTATCAAGAGTTGGCCTGTTCCTACTACACTCACGGAGGTGAGATCATTTCATGGGTTGGCTTCTTTCTATAGGAGGTTCATCAAGAACTTCTCCTCATTGGTTTCTCCTATCACGGATTGTATGAAGAAAGGGTCTTTCTCATGGACCAAATCTGCCCAAGAAGCCTTCGAATTGCTCAAGGATAAGTTGAGCTCAGCTCCTATATTGGCTTTACCTAACTTTGATGCCCCATTTGAGGTTGAATGTGATGCAAGTGGGGTGGGTATTGGCGCGGTTCTTGTGCAAAATGGGCGTCCCATTGCCTACTTTAGTGAGAAGTTGAGTGGCTCAAGGCTCAACTATAGCACCTATGACAAGGAGTTTTATGCTATCATTAGAGCCCTTGATCATTGGATGCATTACCTCAAACCAAGGCAATTTGTGTTGTATTCGGATCACCAAGCTCTCAAGTATATCAATGGCCAACACAAGCTCAATCTGAGGCATGCTAAATGGGTTGAGTTCCTTCAAGCCTACACCTTTGTATCCAAGCACAAGTCCGGAAAAATCAATGTAGTGGCGGATGCTTTGTCTAGGAGGCATAGTATGCTTTCTATCCTTGAGGCTAGGGTGCTTGGCTTTAATTTTATCAAGGAGTTATATGAGGAGGATGAAGACTTTGCCGAGATCATGAAGGAAAGTCCAATGGATGCTAGAAGCTCTTATGTGTTGCAAGATGGTTTCTTATTCAAGAATGGTAGGTTGTGTGTTCCTAAGAACTCTATTAGAGATTTGTTGATTCGAGAGGTGCATGGAGGAGGTTTAGCCGGTAACTTTGGTATCAACAAGACACTTCAAGTGTTAGAAGAACACTTCTATTGGCCTAGGATGCAACAAGATGTCAAGGCCATCATCTCAAGGTGTGCTATTTGTCAACAAGCTAAATCTCATTTTCATCAAGGAGTTTATACTCCCTTGCCGGTTCCAAGTGAACCTTGGAATGATTTGAGCATGGACTTCATTGTGGCTTCACCTCGCACTCAAAGGGGCAAAGACTCAATTATGGTGGTTGTTGATAGATTCTCCAAGATGGCTCACTTCATTCCTTGCTATAAATCTAGTGATGCCGCTAATGTTGCTCACTTGTTCTTTAGAGAGGTGGTGCGCCTCCATGGAGTTCCAAGGAGCATAGTGTCGGATAGGGACACCAAGTTCCTAAGCTATTTTTGGAAGACCTTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_180406.p1 GENE.S_Transcript_180406~~S_Transcript_180406.p1 ORF type:complete len:763 (-),score=146.64,RVT_1|PF00078.23|9.1e-35,zf-H2C2|PF09337.6|3.6e-07,rve|PF00665.22|7.2e-06 S_Transcript_180406:838-3126(-)
MRLCDVVPMDACHVLLGRPWMYDRYVWHNGRANTYSLFVGGKKIVLTSLEPKDIIDPSDQLKTMYMGKGELCDVFASCGNVLALVVVEENETHGVAELPSEVKPLLEEFCDVFPSELPQGLPPIRGIEHQIDLIPGSILPNKPAYRCTPEESRELQRQVDELLERGYVRASMSPCSIPALLVPKKDGSMRMCVDSRAINNITIKYRYPIPRLDDMLDELHGAQVFSKIDLRSGYHQIRMRAGDEWKTAFKTKGGLYEWTVMPFGLSNAPSTFMRLMNEVLRPFLGKFVVVYFDDILVYSKDVCSHLNHLRQVFNTLRQHQIYAKLEKCEFMSSSVTFLGYVVSSQGISMDPSKVEAIKSWPVPTTLTEVRSFHGLASFYRRFIKNFSSLVSPITDCMKKGSFSWTKSAQEAFELLKDKLSSAPILALPNFDAPFEVECDASGVGIGAVLVQNGRPIAYFSEKLSGSRLNYSTYDKEFYAIIRALDHWMHYLKPRQFVLYSDHQALKYINGQHKLNLRHAKWVEFLQAYTFVSKHKSGKINVVADALSRRHSMLSILEARVLGFNFIKELYEEDEDFAEIMKESPMDARSSYVLQDGFLFKNGRLCVPKNSIRDLLIREVHGGGLAGNFGINKTLQVLEEHFYWPRMQQDVKAIISRCAICQQAKSHFHQGVYTPLPVPSEPWNDLSMDFIVASPRTQRGKDSIMVVVDRFSKMAHFIPCYKSSDAANVAHLFFREVVRLHGVPRSIVSDRDTKFLSYFWKTL*

Click here to download the sequence:
Link to NCBI Protein BLAST