Transcript Information: S_Transcript_180420.p1


Annotated TAIR IDAT3G23090.1
Annotated Gene NameTPX2 (targeting protein for Xklp2) protein family
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:8214533-8216983 | Reverse length=338
E-Value6.4E-74
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.9980921081699
Replicate 26.3217162055916
Replicate 34.5446283759016
Condition 2: 8 Hour
Replicate 15.3160715117208
Replicate 24.1666766807514
Replicate 34.7640003243225
Condition 3: 24 Hour
Replicate 13.1296394685665
Replicate 24.2210537319845
Replicate 34.4807070289891


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_180420.p1 GENE.S_Transcript_180420~~S_Transcript_180420.p1 ORF type:complete len:349 (+),score=97.80,TPX2|PF06886.7|2.7e+03,TPX2|PF06886.7|3.7e-20 S_Transcript_180420:285-1331(+)
ATGGACATGGAAGTTAGAGATGCATGTAGAGATAAAGAACCCGATGGCATCATAATATACTCAAGTGGTGCTTCCCCTGTTGTAAGTGATGAGCCTTCACCCACTCAAGATGACTTGAAATCACTTGAACATGAAAAAGGAGTTTCAGATTCATGCATCACGCATGAGGAATATGATGTGAAGGAATGTACCACAGATAACTTGGTTAAAGACTCTGAAGCTCGTCAAGTTGGAAATTTCAAGGAAAACAGCCATCTGCAGGAAAAGGTGAAAGCTCAAAGCTTGAAAACAAAGGATGAAAAAAAGAGAAGTGTTTCAACAAAGCTTGCATCAAAGCCCTGTAGTACGAATGGTCGAGTACACTGTACAGTTCCTCAGCCATTTGCTCTGGCAACTGAAAAGCGAGCGTCGAATCATCCCCAAGAGACTGAAATTGACGGGAATAAATTGTCACTAACACCAAGGTGCACACAGCCACCAAACAACGTTAAGAAAAATCAGGAAACTTCAATGCCTGTATCAAGGAAGCTGCTACAACCTGACAACATAAAACATCTTGATGAGGAAGATTCAAATTCTGGGGTTTCTGATATTACACAATCTGGAAGGCCTTCTAGGTCCAAGACAACTGTTGCATCAGCTCCAGTGTTCAGATCCTCTGAACGTGCAGAGAAGCGCAGGGAGTATTACTCAAAATTGGAGGAGAAACATCAAGCTTTAGAGGCAGAGAAAGTGCAAAGTGAAGCAAGGACAAAGGAAGAGAAAGAAGCAGCCATCAAGCAACTGAGAAGGAGTATGATGTTTAAGGCCACTCCAATGCCAACCTTTTACCATGAAGGACCACCTCCGAAGCTTGAACTGAAAAAGGCTCCTCCAACTCGTGCAAAATCGCCAAAGCTTGGAAGAAGGAAAAGCTGCAGTGATGCCGATGACAAGTGTAAGAAAAGCTCTAGCAAGGGGAATCGTCATAGTCTGTGCATCCAGAAGGAGACTCTTAGCATCCCAGAGATGCAGCCTGTGGTTCAACCATATATTTTTGATCGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_180420.p1 GENE.S_Transcript_180420~~S_Transcript_180420.p1 ORF type:complete len:349 (+),score=97.80,TPX2|PF06886.7|2.7e+03,TPX2|PF06886.7|3.7e-20 S_Transcript_180420:285-1331(+)
MDMEVRDACRDKEPDGIIIYSSGASPVVSDEPSPTQDDLKSLEHEKGVSDSCITHEEYDVKECTTDNLVKDSEARQVGNFKENSHLQEKVKAQSLKTKDEKKRSVSTKLASKPCSTNGRVHCTVPQPFALATEKRASNHPQETEIDGNKLSLTPRCTQPPNNVKKNQETSMPVSRKLLQPDNIKHLDEEDSNSGVSDITQSGRPSRSKTTVASAPVFRSSERAEKRREYYSKLEEKHQALEAEKVQSEARTKEEKEAAIKQLRRSMMFKATPMPTFYHEGPPPKLELKKAPPTRAKSPKLGRRKSCSDADDKCKKSSSKGNRHSLCIQKETLSIPEMQPVVQPYIFDR*

Click here to download the sequence:
Link to NCBI Protein BLAST