Transcript Information: S_Transcript_180427.p2


Annotated TAIR IDAT5G61000.1
Annotated Gene NameReplication factor-A protein 1-related
Annotated Gene Symbol(s)RPA70D, ATRPA70D
Annotation TypeHomolog
Chromosome Positionchr5:24549682-24552641 | Reverse length=629
E-Value1E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.86312436438423
Replicate 20.83480825352759
Replicate 30.79752372253408
Condition 2: 8 Hour
Replicate 10.57636190046305
Replicate 20.24185782313218
Replicate 30.80654558505335
Condition 3: 24 Hour
Replicate 10.59040225650254
Replicate 20.12250708960188
Replicate 30.68167687581395


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_180427.p2 GENE.S_Transcript_180427~~S_Transcript_180427.p2 ORF type:complete len:185 (+),score=20.91,REPA_OB_2|PF16900.1|4.8,REPA_OB_2|PF16900.1|0.00035 S_Transcript_180427:120-674(+)
ATGAAACCGGAATATGTGCCACTCAACAAGCTAGCCACACAAACTGGACCTCACAAAGTCCAAGTGCGTGTGATTGAGAAGTGCAGACCCAGAACATCAGCAAAAAACCACCGATTCCAGAATCTTATGCTTACTGATGAGCTTGGCAACAAAATGAGGGCTACAATATTCAATGATGATATCAATGCATATGAAAACCTTATCAAAGTTAATGGTCTCTATGAGATAGCAAATCCCACAATCAAACCACTTCCCCAAAGGTTTCAGAACTACCCAGATGAACACCAAATGACCCTAACAGCATCGACAAGCATTCATACTGTTGAGAAACCAATTCTGCAGGATGGCCCACACTATCACAGCATGGCCTCAGTTCCGAAAACCGCCACCCCAGAAGAACGCATAGACATACTTGGCGTTGTCCTATACGCGGAAGCAGTGAGACAAGTAAATGGCATTCAAGGGCGCACTGTCGATGTTAGGGAAATTGTCATCACAGATAGTAGCACCCCACGAACAATGACTATGTCATTGTGGAATGATTTGGCTTGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_180427.p2 GENE.S_Transcript_180427~~S_Transcript_180427.p2 ORF type:complete len:185 (+),score=20.91,REPA_OB_2|PF16900.1|4.8,REPA_OB_2|PF16900.1|0.00035 S_Transcript_180427:120-674(+)
MKPEYVPLNKLATQTGPHKVQVRVIEKCRPRTSAKNHRFQNLMLTDELGNKMRATIFNDDINAYENLIKVNGLYEIANPTIKPLPQRFQNYPDEHQMTLTASTSIHTVEKPILQDGPHYHSMASVPKTATPEERIDILGVVLYAEAVRQVNGIQGRTVDVREIVITDSSTPRTMTMSLWNDLAC*

Click here to download the sequence:
Link to NCBI Protein BLAST