Transcript Information: S_Transcript_180457.p2


Annotated TAIR IDAT1G67025.1
Annotated Gene NameBEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G18390.1); Has 221 Blast hits to 191 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 221; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:25013344-25014435 | Reverse length=221
E-Value1E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.22942242444121
Replicate 21.1411787702163
Replicate 30.31797820833794
Condition 2: 8 Hour
Replicate 10.18383957169942
Replicate 20.38572152827115
Replicate 31.102543841637
Condition 3: 24 Hour
Replicate 10.37663592225162
Replicate 20.78151074401198
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_180457.p2 GENE.S_Transcript_180457~~S_Transcript_180457.p2 ORF type:complete len:116 (+),score=-0.78,GUB_WAK_bind|PF13947.2|1.5e-06 S_Transcript_180457:997-1344(+)
ATGCATTTTGTCATCACATTCTTCATCATCTTCTTAACTACCATTCCATTCTCGAATGGAAGGGATACATATTATAAGGTCTGCTCCTCTGTTAACTACTTGTGTGGGAGAGTCCAGAACATTGGTTACCCATTTTGGGGTGGCGAAAGGCCTGAATTCTGTGGCCTTCCCGAATTCTCGCTAACATGTTCTAATGGCAGTGAGTACCCTAGTATAGAAGCTATAGAAAATAGGTATTATGTTAAGGTAAAAGTGCTTAGCATTGATACATCCTCTCAAAAAATGACCATCAGTAAATTTAGCTACCCAAGCCTTTTTGCCGTGATGGTAAATCGAGTCGTACGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_180457.p2 GENE.S_Transcript_180457~~S_Transcript_180457.p2 ORF type:complete len:116 (+),score=-0.78,GUB_WAK_bind|PF13947.2|1.5e-06 S_Transcript_180457:997-1344(+)
MHFVITFFIIFLTTIPFSNGRDTYYKVCSSVNYLCGRVQNIGYPFWGGERPEFCGLPEFSLTCSNGSEYPSIEAIENRYYVKVKVLSIDTSSQKMTISKFSYPSLFAVMVNRVVR*

Click here to download the sequence:
Link to NCBI Protein BLAST