Transcript Information: S_Transcript_180460.p1


Annotated TAIR IDAT5G38250.1
Annotated Gene NameProtein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:15280643-15282709 | Reverse length=579
E-Value2E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.54684249113384
Replicate 20.45334499090784
Replicate 30.44212038556577
Condition 2: 8 Hour
Replicate 10.36516079310159
Replicate 20.15323183999813
Replicate 30.21899843429775
Condition 3: 24 Hour
Replicate 10.074811244830802
Replicate 20.62092634455746
Replicate 30.51826118640649


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_180460.p1 GENE.S_Transcript_180460~~S_Transcript_180460.p1 ORF type:3prime_partial len:292 (+),score=15.78,WAK_assoc|PF14380.2|1.2e-14,GUB_WAK_bind|PF13947.2|1.4e-07,GUB_WAK_bind|PF13947.2|4.9e+03 S_Transcript_180460:964-1836(+)
ATGCATTTTTTCATCACATTCTTCATCATCTACTTGACTACCATTCCATTCTCTAATGGAAGCGATCCATATTATAACGTCTGCTCCTCTGTTTACTACTCGTGTGGGAGAGTCCATAACATTGGTTATCCATTTTGGGGTCGCGAAAGGCCTCAATTCTGTGGCCTTCCCGAATTCTCGCTAACATGTTCTAATGGCAGTGAGTACCCTAGTATAGAAGCTGTAGAAAATAGCTATGATGGTCAGGTAAAAGTGCTTAGAATCGATACATCCTCTCAAAAAATGACCATCAGTAAATTTAGCTTCCCTAAGCCTTCTTGCCGTCATGGTAATTGGAGTGATACGCTGAATTTGTCAACAACCTTCAAACCCATACCGAGTGTTCAAAACATCACCTTATTCTACGGTTGCCCTAACTCGATCCAAACAGATGAACCCAAATCCTTTTCATTTATGTGCTCAAACTATAACCATACCAACGGATCTGCTCTTTACTTCCCTGAACCATCAGAACCTAATTTCAGAAAAAACCTTAAGCTTTGCAAGACTAACTATTCTATTCCGGTGCCTAAGAGAGGGCTAGATGAGCTCAAAAATGGAAATGCCACACTTTTAAGTGTCTTGCAACAGGGGTTTGAGGTGGAGTATGTAGCCAACTTCACATCCTGTATGATTTGTAAGAAATCTGGTGGCACTTGTGGATCGTCTGTGTCGAATTCTACATCATCAAGCTTTGTATGTCACTGCCCAGATGGAACCCAGTCACCAATGTGTCATATATCAGAAAACAAAAAGGTGGGGTTGATAATTGGATTAGGCATTTCAGGAGGTATAATTTTGCTGATAGCAGCACTAGTAGCATTGTGGTACCGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_180460.p1 GENE.S_Transcript_180460~~S_Transcript_180460.p1 ORF type:3prime_partial len:292 (+),score=15.78,WAK_assoc|PF14380.2|1.2e-14,GUB_WAK_bind|PF13947.2|1.4e-07,GUB_WAK_bind|PF13947.2|4.9e+03 S_Transcript_180460:964-1836(+)
MHFFITFFIIYLTTIPFSNGSDPYYNVCSSVYYSCGRVHNIGYPFWGRERPQFCGLPEFSLTCSNGSEYPSIEAVENSYDGQVKVLRIDTSSQKMTISKFSFPKPSCRHGNWSDTLNLSTTFKPIPSVQNITLFYGCPNSIQTDEPKSFSFMCSNYNHTNGSALYFPEPSEPNFRKNLKLCKTNYSIPVPKRGLDELKNGNATLLSVLQQGFEVEYVANFTSCMICKKSGGTCGSSVSNSTSSSFVCHCPDGTQSPMCHISENKKVGLIIGLGISGGIILLIAALVALWYR

Click here to download the sequence:
Link to NCBI Protein BLAST