Transcript Information: S_Transcript_180470.p1


Annotated TAIR IDAT5G17210.1
Annotated Gene NameProtein of unknown function (DUF1218)
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:5656519-5657970 | Forward length=209
E-Value4E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 179.1635468214
Replicate 290.04305992001
Replicate 390.996647072385
Condition 2: 8 Hour
Replicate 148.6045698091
Replicate 226.573667927391
Replicate 328.998208924543
Condition 3: 24 Hour
Replicate 140.25224724409
Replicate 233.593060813672
Replicate 320.100817114737


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_180470.p1 GENE.S_Transcript_180470~~S_Transcript_180470.p1 ORF type:complete len:197 (+),score=23.58,DUF1218|PF06749.8|3.3e+02,DUF1218|PF06749.8|1.2e-14 S_Transcript_180470:189-779(+)
ATGGCTAGTAGAAATGCTGTAGTTTTATCTGCTGTTCTTCTTGGTATAGTAGCAGTCGGTTTGAGTTTCGCTGCTTATACCAACAGGATTAAGGCTGCTGATGTGACTGTAGTGAACGGAAATTGTACGTATCCAAGCAGGCCAGCAACTGCTCTAGGGATTCTAGCAGCACTTGTTCTTCTAATTGAGCAAATTCTTGTGAGTGTTGGGACTCGTTGTTTCTGTTGTGGTGGTAGACGTTGTCCTTCAAGCTGTGCTGGTATCACATCTATTATCCTCTTCATCTTGTCTTGGGCGAGCTTCATCATAACGTTTGCAGGATTGATAGCTACAGCCAGATTGAACGACGGCAGCTATCTAACAGATGCTTATCCTGGCAACGGTACTAGCATTGGGGGTGATAAAATTTTATGTTACAGAGGCAACGAAAATTTGTTCCTTGGGGCAGCTATTTGGTGCGTTATTAGCATTGTTCTTGGCGTCATCTCCTTGCTTTTATTCAGGCCCAACAGTGATCATCAAAACAACCAAGCAGCTCCTCAGTTTGCTTATGAGCATGGTGTTGCCATGGGACAACCAGCTTACAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_180470.p1 GENE.S_Transcript_180470~~S_Transcript_180470.p1 ORF type:complete len:197 (+),score=23.58,DUF1218|PF06749.8|3.3e+02,DUF1218|PF06749.8|1.2e-14 S_Transcript_180470:189-779(+)
MASRNAVVLSAVLLGIVAVGLSFAAYTNRIKAADVTVVNGNCTYPSRPATALGILAALVLLIEQILVSVGTRCFCCGGRRCPSSCAGITSIILFILSWASFIITFAGLIATARLNDGSYLTDAYPGNGTSIGGDKILCYRGNENLFLGAAIWCVISIVLGVISLLLFRPNSDHQNNQAAPQFAYEHGVAMGQPAYK*

Click here to download the sequence:
Link to NCBI Protein BLAST