Transcript Information: S_Transcript_180500.p1


Annotated TAIR IDAT3G50340.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G67020.1); Has 128 Blast hits to 128 proteins in 39 species: Archae - 0; Bacteria - 46; Metazoa - 0; Fungi - 3; Plants - 76; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:18665333-18666544 | Reverse length=403
E-Value8.2E-209
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0127925926619
Replicate 21.5090115499244
Replicate 31.3919046100831
Condition 2: 8 Hour
Replicate 12.4644908621215
Replicate 21.9522603765799
Replicate 32.4131148232054
Condition 3: 24 Hour
Replicate 10.61825141954512
Replicate 21.2294048732453
Replicate 31.36817693707


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_180500.p1 GENE.S_Transcript_180500~~S_Transcript_180500.p1 ORF type:complete len:424 (+),score=13.21 S_Transcript_180500:200-1471(+)
ATGGTGGATGTGGACCGGAGAATGACCGGTCTGAACCCGGCACACATAGCGGGACTCCGGCGACTCTCGGCTCGAGCCGCATCCGGCCCATCACCCTCAACCCCTATTCCCACCAGAAACAGTCTCCAATCTCTCTCCTCCCTAGCCTCAAAGCTCATAACTCACCTCCAAAGCTCCGGCATTCAAGTCCAACCAGGCCTGTCCGACGCAGAGTTCGCCCGAGCCGAAGCCGAGTTCGGGTTCGCATTCCCACCTGACCTAAAAGCAGTCCTTCAGGCTGGACTCCCAGTTGGGCCTGGATTCCCTGACTGGAGGTCCACTGGAGCTCGGCTACACCTGCGCGCCCTCATTGACCTCCCAATCGCCGCAATCTCACTCCAGATCGCAAAGAACGCCCTCTGGTCCAAATCATGGGGCCCACGACCCTCCCACCCTGAGAAGGCCCTCAAGGTCGCTAGAGTTGCACTCAGGAGAGCCCCTCTTTTAATCCCCATTTTCAACCATTGTTACATCCCTTGTAACCCCTGCTTAGCTGGCAACCCGGTTTTCTACGTGGACGAGAATCGGATCTTCTGTTGTGGGCTGGACCTATCCGATTTCTTCGAGCGTGAGTCCATTTCGTCATTTCAAACCAGCTCCGACCCGGACACCCTCCAGAAGCAAAGATCCGTGAGCGGCTCCTCATCCTCGTCGTCTTCCTCGTCTTCGTATTCCTCAAACGGGTCGAACTTCTCTCGTCGAAGGAGTCTGGATTCGGGCATTCGGACCCCGAGATGGGTCGAGTTCTGGAGTGAAGCTGCCATTGATCGTCGGAAACGGAACTCCAACTCATCCTCTTCAAACTACTCCACGCCCTCCTCCCCTGAGCGGTTCTTCGACATACCGAGATCCGAGACTCGGACATGGGTATCCGACTACATCAACCAAATCGGGTCGGTTCTGAGAGAAGGCGGGTGGGATGAATCAGACGTGTCGGAGATTGTCCAGGTGTCAGCCTCTGGGTTCTTCGAAGGCGGTGAGATGGTCCTCGTTGACAACCAAGCGGTTCTCGATGCGTTGTTGCTTAAAGCGGATCGGTTCTCGGACTCGCTCCGGAAAGCCGGGTGGAGCTCCGAGGAAGTGACGGACGCATTCGGGTTCGATTTCAAGGCACCGGAAAAGGAAAGGAAACCGGTGAAGAAACTCTCGCCTCAGCTGGTGGAGAGGATAGGGAAACTGGTTGAATCGGTTAACCGGATATCATCCGGTGGTATTGGTATAGCAGCATCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_180500.p1 GENE.S_Transcript_180500~~S_Transcript_180500.p1 ORF type:complete len:424 (+),score=13.21 S_Transcript_180500:200-1471(+)
MVDVDRRMTGLNPAHIAGLRRLSARAASGPSPSTPIPTRNSLQSLSSLASKLITHLQSSGIQVQPGLSDAEFARAEAEFGFAFPPDLKAVLQAGLPVGPGFPDWRSTGARLHLRALIDLPIAAISLQIAKNALWSKSWGPRPSHPEKALKVARVALRRAPLLIPIFNHCYIPCNPCLAGNPVFYVDENRIFCCGLDLSDFFERESISSFQTSSDPDTLQKQRSVSGSSSSSSSSSSYSSNGSNFSRRRSLDSGIRTPRWVEFWSEAAIDRRKRNSNSSSSNYSTPSSPERFFDIPRSETRTWVSDYINQIGSVLREGGWDESDVSEIVQVSASGFFEGGEMVLVDNQAVLDALLLKADRFSDSLRKAGWSSEEVTDAFGFDFKAPEKERKPVKKLSPQLVERIGKLVESVNRISSGGIGIAAS*

Click here to download the sequence:
Link to NCBI Protein BLAST