Transcript Information: S_Transcript_180517.p1


Annotated TAIR IDAT1G08840.2
Annotated Gene NameDNA replication helicase, putative
Annotated Gene Symbol(s)emb2411
Annotation TypeOrtholog
Chromosome Positionchr1:2829579-2838369 | Reverse length=1315
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6119513812283
Replicate 21.1529248699889
Replicate 31.4237266572851
Condition 2: 8 Hour
Replicate 11.722240548177
Replicate 22.4975698006346
Replicate 32.5568890832579
Condition 3: 24 Hour
Replicate 10.83020934881118
Replicate 20.88824914729153
Replicate 31.5277010269132


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_180517.p1 GENE.S_Transcript_180517~~S_Transcript_180517.p1 ORF type:complete len:842 (+),score=130.17,AAA_12|PF13087.2|7.8e+03,AAA_12|PF13087.2|2.2e-51,AAA_11|PF13086.2|1.9e+03,AAA_11|PF13086.2|2.5e-15,AAA_11|PF13086.2|7.2e-18,AAA_30|PF13604.2|6.5e-12,AAA_30|PF13604.2|1.6e+03,AAA_19|PF13245.2|1.8e-08,AAA_19|PF13245.2|1.1e+02,Dna2|PF08696.7|8.3e-07,PDDEXK_1|PF12705.3|9.4e-06 S_Transcript_180517:25-2550(+)
ATGTTATGGATACTGGCCAGGGATCTGCATTTGGGTCCATACTTCAGATATACACCTGCTTGTGTGTTACAGTTTGTTGAGAAAGTTGTTGATTATCAGGTAATTGATATTGAAGAAATGGCATGGGCACCAAAATATGGCCTAAAAGGAGTAATTGATGCTTCTCTTCGAGTACAAATCCACTCTGACGGGATAGAAGCTGACGAAAAGATCTTGCCACTAGAGTTTAAGACTGGTAAAGCAATCAAAGGCCAGTCGCAGATGGAACACTCTGCCCAGTTGATTTTGTACACTCTTCTCTTGTCTGAGCGGTATTTGCAGACGATTGATTCAGGCCTTTTATATTATCTTTCAACAGATGAGACATTGGGAACACCTGTTCGGAGATTGGACTTGGTTGGTCTGATTATGCGTCGCAACGAACTAGCACATGAAATTATCAAGGCCTCAATGGTCCAACAACTTCCATCAATGCAACAGAGTCCGAATCTCTGTAGAAGTTGTCGCCACCTGAATGCTTGTACCATTTATCATAAGATGCATGGTGGAGGTACTGAAAGCAGTGGGTTGGGGGACCTTTTTAATTCGCTTACTAAACATTTAACCACCCCTCATAAAATTTTCTTCAAGCAATGGGATCGATTAATTGACCTGGAAGCTAAAGACGTGCAGTTATCCAAAAGTGGGACATGGAGATCACATGATGCAAAGAATCAAAGCTCCTCTTGCAGCCTTTATTCCATTGTTCTTGATGCCTCAAATGAGCTTCTACAAACATATGCCACAGACAAGCGCTTTGAATATCGCTTTGTGCGTATAGATCAATCTTTTCTAAATGAGAGAAGGCATAGCAAAAATTTTAAGGAGAGCTCATCTTCTGCAGAGAATGATTTGAATTGCACTCTACGTAAAGGCGATCGTGTGATCTTGAGTGCTGAATCAATTCGTATTGGAGTTGCAAGTGGGATCATCTCAGAAATCACATGCTCTCATATTTCTGTTTCTTTTTCAAAGTGGTTAAGGCTTCCAAGGAGCTCGCAGTCAATTTCACAGGATCTTAATCAGGAGGTCTGGCGAATAGAGAAGGATGAAGTCACCACAACCTTTGCTACCATGAGGTTCAATCTGGTGCAGCTCTTTCTAAAAAGTGCACACAGTGATCACTTGAGGAAGTTAATTGTGGACCTTGAAGCTCCTAGATTTGACAGTGGATCTATACTTAGCCAAGATCCAGCATTGTCCTATATTTGGTCTGAGAGGAATTTAAATAATGATCAGCGCAGAGCAATAATTAAGATACTCACATCAAAGGATTATGCTCTAATTCTTGGAATGCCTGGTACTGGCAAGACATCAACAATGGTGTATGCGGTAAAGGCCTTGTTGATGAGAGGTGCTACAATCTTACTTACATCATACACAAACTCAGCTGTTGATAATTTGCTTATAAAACTGAAAGCTCAGGGGATTGATTTTGCACGTATTGGGAGACGTGAAGTTGTGCACAAGGAAGTTCGGGAGCATTGTCTTTCAGATATGGACATACAGAGTGTGGATGAAATTAAATTGAAGCTGGATCAAGTCAAAGTTGTTGCAGTAACTTGTCTAGGGATAACCAGTCCCTTGCTTGCAAATAAGAAATTTGATATATGCATAATTGATGAGGCTGGACAGACTAGTCTCCCGGTATCCTTAGGACCATTAATGTTTGCTTCCACGTTCGTTCTTGTTGGAGACCATTACCAGTTACCACCACTTGTGAAGAGTGAAGAGGCTCGAGAAAATGGAATGTCTGTTAGCTTGTTCCGTAGGCTGTCAGAAGGACATCCCCAAGCAATATCAGCTCTACAAAGCCAGTATCGTATGTGTGCAGGTATCATGAAACTTTCAAATGCCCTTATATATGGTGATAGACTGCGGTGTGGTTCGCCTGATGTGGAGAATGCAAAACTTAAGTTATTGAATGGCGCGTCCATGCCCTCTTGGCTGAAAGAGGTTTTGGATGCTAACAAACCAGTAATATTTATTAACACAGATATCTTACCTGCCTTTGAGGCAAAGGATCAGAAGACAGTGAATAACCCAATTGAGGCTCATATTGTAGCAGAGCTTGCTGAGGCATTAGCTAACCACGGAGTTGAGAAAGAAGAAATCGGAATTATTACCCCTTACAACTCTCAGGCAAACCTTATCCAGAATGTTGTGAACATGACAGCCGTAGAGGTCCATACAATCGACAAATACCAGGGAAGGGACAAGGACTGTATATTATTGTCCTTTGTTAGATCGTCTCCAAATATAAGGAATTGCTCATCTTCATTACTTGGTGATTGGCACAGAATCAATGTGGCTTTAACACGTGCCAAGAAGAAGCTGATAATGGTAGGCTCGTGCAAAACTCTATCTAGGGTTCCTCTTCTGAAACTTCTGATTGAGAAAGTCGAAGAGCAGTCCGGAATATTTTGTATGAACAGAAATGATATCGAAAGGAAGTCAGAGTTAAAGAGATGTTCAGTGCTCAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_180517.p1 GENE.S_Transcript_180517~~S_Transcript_180517.p1 ORF type:complete len:842 (+),score=130.17,AAA_12|PF13087.2|7.8e+03,AAA_12|PF13087.2|2.2e-51,AAA_11|PF13086.2|1.9e+03,AAA_11|PF13086.2|2.5e-15,AAA_11|PF13086.2|7.2e-18,AAA_30|PF13604.2|6.5e-12,AAA_30|PF13604.2|1.6e+03,AAA_19|PF13245.2|1.8e-08,AAA_19|PF13245.2|1.1e+02,Dna2|PF08696.7|8.3e-07,PDDEXK_1|PF12705.3|9.4e-06 S_Transcript_180517:25-2550(+)
MLWILARDLHLGPYFRYTPACVLQFVEKVVDYQVIDIEEMAWAPKYGLKGVIDASLRVQIHSDGIEADEKILPLEFKTGKAIKGQSQMEHSAQLILYTLLLSERYLQTIDSGLLYYLSTDETLGTPVRRLDLVGLIMRRNELAHEIIKASMVQQLPSMQQSPNLCRSCRHLNACTIYHKMHGGGTESSGLGDLFNSLTKHLTTPHKIFFKQWDRLIDLEAKDVQLSKSGTWRSHDAKNQSSSCSLYSIVLDASNELLQTYATDKRFEYRFVRIDQSFLNERRHSKNFKESSSSAENDLNCTLRKGDRVILSAESIRIGVASGIISEITCSHISVSFSKWLRLPRSSQSISQDLNQEVWRIEKDEVTTTFATMRFNLVQLFLKSAHSDHLRKLIVDLEAPRFDSGSILSQDPALSYIWSERNLNNDQRRAIIKILTSKDYALILGMPGTGKTSTMVYAVKALLMRGATILLTSYTNSAVDNLLIKLKAQGIDFARIGRREVVHKEVREHCLSDMDIQSVDEIKLKLDQVKVVAVTCLGITSPLLANKKFDICIIDEAGQTSLPVSLGPLMFASTFVLVGDHYQLPPLVKSEEARENGMSVSLFRRLSEGHPQAISALQSQYRMCAGIMKLSNALIYGDRLRCGSPDVENAKLKLLNGASMPSWLKEVLDANKPVIFINTDILPAFEAKDQKTVNNPIEAHIVAELAEALANHGVEKEEIGIITPYNSQANLIQNVVNMTAVEVHTIDKYQGRDKDCILLSFVRSSPNIRNCSSSLLGDWHRINVALTRAKKKLIMVGSCKTLSRVPLLKLLIEKVEEQSGIFCMNRNDIERKSELKRCSVLR*

Click here to download the sequence:
Link to NCBI Protein BLAST