Transcript Information: S_Transcript_18077.p1


Annotated TAIR IDAT5G19990.1
Annotated Gene Nameregulatory particle triple-A ATPase 6A
Annotated Gene Symbol(s)RPT6A, ATSUG1
Annotation TypeOrtholog
Chromosome Positionchr5:6752144-6754918 | Forward length=419
E-Value7.2E-278
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 175.640200726441
Replicate 281.698868059846
Replicate 381.815571674813
Condition 2: 8 Hour
Replicate 187.72602559693
Replicate 288.55307141386
Replicate 387.736226568995
Condition 3: 24 Hour
Replicate 175.772855727235
Replicate 269.621546466552
Replicate 373.032741108086


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_18077.p1 GENE.S_Transcript_18077~~S_Transcript_18077.p1 ORF type:complete len:431 (+),score=103.44,AAA|PF00004.25|1.5e-43,AAA|PF00004.25|1e+04,AAA_2|PF07724.10|5.1e-07,AAA_16|PF13191.2|9.9e+03,AAA_16|PF13191.2|2e-05,AAA_16|PF13191.2|3.6e+03,AAA_5|PF07728.10|1e-05,AAA_5|PF07728.10|1e+04 S_Transcript_18077:80-1294(+)
ATGGCGAGTGTGGAGGTAGAGAAGAAAGCAGTGAAGCAAGGAGAAGGACTTCGACAGTACTATCTTCAACGTATCCATGAACTTCAGCTTCAAGTCCGTCACAAAAACCACAATCTCCAGCGCCTCGAAGCCCAGCGTAACGAGCTAAATTCCAGAGTTAGGGCGCTGAAAGAGGAATTGCAGCTGTTGCAAGAACCTGGATCATATGTCGGGGAAGTCGTGAAAGTGATGGGAAAATCAAAAGTTCTTGTCAAAGTGCATCCAGAAGGAAAATATGTTGTTGATATTGACAAGAACATTGACATTACTAAGCTTACTCCATCAACTAGAGTTGCATTGCGAAATGACAGCTATGTTCTCCATCTAGTCTTGCCAAGTAAGGTGGACCCTCTAGTCAACCTTATGAAAGTCGAGAAGGTTCCTGACTCTACATATGACATGATTGGTGGCCTCGACCAGCAAATTAAAGAGATTAAGGAGGTCATTGAGCTCCCAATAAAACATCCTGAGTTGTTTGAGAGTCTTGGAATTGCCCAACCAAAGGGTGTTCTTCTTTATGGTCCTCCTGGAACTGGGAAAACCTTGTTGGCAAGAGCTGTTGCTCACCACACAGATTGTACTTTTATTAGAGTATCAGGTTCTGAGTTGGTACAGAAGTACATTGGAGAGGGTTCTCGGATGGTGAGGGAGCTTTTTGTAATGGCCAGAGAGCATGCTCCATCAATCATTTTTATGGATGAGATTGATAGTATAGGGTCTGCAAGAATGGAGTCTGGCTCTGGGAATGGTGATAGTGAAGTTCAGCGAACTATGTTGGAGCTTCTCAACCAGCTCGATGGATTTGAAGCATCAAACAAGATCAAGGTGTTGATGGCTACAAACCGGATTGATATTCTGGATCCTGCTCTTCTTAGGCCTGGGAGAATTGATAGGAAAATTGAGTTTCCAAATCCGAATGAAGAGTCACGTTTTGACATCTTGAAGATCCATTCAAGAAAGATGAACTTAATGAGAGGAATCGATCTAAAGAAGATTGCAGAGAAAATGAATGGTGCATCTGGTGCGGAGCTTAAGGCGGTGTGCACAGAAGCTGGTATGTTCGCTCTAAGGGAGAGAAGAATCCATGTGACACAAGAAGACTTTGAGATGGCAGTGGCGAAGGTAATGAAGAAGGATACAGAGAAGAACATGTCCCTTCGGAAGCTATGGAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_18077.p1 GENE.S_Transcript_18077~~S_Transcript_18077.p1 ORF type:complete len:431 (+),score=103.44,AAA|PF00004.25|1.5e-43,AAA|PF00004.25|1e+04,AAA_2|PF07724.10|5.1e-07,AAA_16|PF13191.2|9.9e+03,AAA_16|PF13191.2|2e-05,AAA_16|PF13191.2|3.6e+03,AAA_5|PF07728.10|1e-05,AAA_5|PF07728.10|1e+04 S_Transcript_18077:80-1294(+)
MASVEVEKKAVKQGEGLRQYYLQRIHELQLQVRHKNHNLQRLEAQRNELNSRVRALKEELQLLQEPGSYVGEVVKVMGKSKVLVKVHPEGKYVVDIDKNIDITKLTPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDPALLRPGRIDRKIEFPNPNEESRFDILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKDTEKNMSLRKLWK*

Click here to download the sequence:
Link to NCBI Protein BLAST