Transcript Information: S_Transcript_180789.p1


Annotated TAIR IDAT4G29790.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G19390.1); Has 538 Blast hits to 357 proteins in 124 species: Archae - 0; Bacteria - 74; Metazoa - 109; Fungi - 58; Plants - 105; Viruses - 2; Other Eukaryotes - 190 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:14584228-14590123 | Forward length=1211
E-Value8E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.98566671241409
Replicate 20.40857017699101
Replicate 30.34153214969631
Condition 2: 8 Hour
Replicate 11.3822012242586
Replicate 20.20714674666413
Replicate 30.98684479652691
Condition 3: 24 Hour
Replicate 11.2136046383663
Replicate 20.6295503215652
Replicate 30.46707489639104


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_180789.p1 GENE.S_Transcript_180789~~S_Transcript_180789.p1 ORF type:internal len:108 (+),score=13.32 S_Transcript_180789:2-322(+)
AGCTTTTCTCGGATGGCTGGAACACCCGAAGATTGGGAACAACCCCTAAATGCGAATAAAGTCCATTCATTGGCTGGAGTTAATAACCGCAAACGTCCGCTTCCTACGGAATCATCGTCACCCCCAATGGCTCAATGGGTGGGACAAAGACCACAGAAAATTTCCCGTAATCGGCGAACAAATATTGTATCGCCAACATCCAACCATGATGAGACGCTGGTGTCATCTGAAACTTGTGCTTCTGATTTTAGTTCCAGAATTCCTGGTGGGATGAATGGATCACTTCCTGTCAGACCTGTGGCGAGTAACTGTCAGCAGCTA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_180789.p1 GENE.S_Transcript_180789~~S_Transcript_180789.p1 ORF type:internal len:108 (+),score=13.32 S_Transcript_180789:2-322(+)
SFSRMAGTPEDWEQPLNANKVHSLAGVNNRKRPLPTESSSPPMAQWVGQRPQKISRNRRTNIVSPTSNHDETLVSSETCASDFSSRIPGGMNGSLPVRPVASNCQQL

Click here to download the sequence:
Link to NCBI Protein BLAST