Transcript Information: S_Transcript_18080.p1


Annotated TAIR IDAT5G19990.1
Annotated Gene Nameregulatory particle triple-A ATPase 6A
Annotated Gene Symbol(s)RPT6A, ATSUG1
Annotation TypeOrtholog
Chromosome Positionchr5:6752144-6754918 | Forward length=419
E-Value2.1E-189
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 137.818475439467
Replicate 238.029282000453
Replicate 331.000783351052
Condition 2: 8 Hour
Replicate 138.652269949804
Replicate 232.821856885915
Replicate 337.232615388964
Condition 3: 24 Hour
Replicate 136.144659196608
Replicate 234.14482138805
Replicate 329.536341474412


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_18080.p1 GENE.S_Transcript_18080~~S_Transcript_18080.p1 ORF type:3prime_partial len:304 (+),score=68.75,AAA|PF00004.25|2.4e-34,AAA_2|PF07724.10|2.8e-07,AAA_16|PF13191.2|1.5e-05,AAA_16|PF13191.2|8.1e+02,AAA_5|PF07728.10|9.8e-06 S_Transcript_18080:924-1832(+)
ATGGCGACAGCTCTCACAGAGCGAAGTAATCCAGCACCAATGTCAACTGCTACAACAACTAATCATGGGGATGGTTTGAGGCTTTACTATCTTAAACGCATCAACGAAGTCGAGCATCTTCTTCGCCAAAAGACTCTCGATCTCAGCCGTCTTGAAGCTCACCGTAACGAGCTTAATTCACGAGTCAGAATGTTGAAAGAAGAACTGATGCTGCTCCAGGAACCTGGATCATATGTTGGTGAAGTCGTCAAAGTCATGGGGAAGTCTAAGGTCTTGGTTAAGGTTCATCCAGAAGGAAAATATGTTGTTGATATTGATAAGAGCATCGACATAACAAAACTCACTCCATCCACTAGAGTTGCTCTTCGTAATGACAGCTATGTTCTCCATTTGATTTTGCCAAGCAAAGTAGATCCCTTGGTAAATCTTATGAAAGTTGAGAAAGTTCCAGATTCTACTTATGATATGATTGGTGGTTTGGACCAGCAAATCAAAGAGATAAAAGAGGTTATTGAGCTCCCAATCAAGCATCCTGAGTTGTTTGAGAGTCTTGGGATTGCTCAACCAAAGGGAGTATTGCTATATGGCCCACCTGGAACAGGAAAAACATTGCTTGCTAGGGCAGTTGCACATCACACTGACTGTACATTTATCAGGGTCTCTGGGTCTGAGTTAGTACAAAAGTATATTGGAGAGGGCTCTCGGATGGTTAGAGAACTTTTTGTCATGGCCAGAGAACATGCTCCATCTATTATCTTTATGGATGAAATTGACAGTATTGGATCAGCTAGGATGGAATCAGGATCTGGTAATGGGGACAGTGAAGTTCAACGAACTATGCTGGAGCTTCTCAATCAATTGGATGGATTTGAAGCATCAAACAAGATCAAGGTGTTGATGGCTACAAAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_18080.p1 GENE.S_Transcript_18080~~S_Transcript_18080.p1 ORF type:3prime_partial len:304 (+),score=68.75,AAA|PF00004.25|2.4e-34,AAA_2|PF07724.10|2.8e-07,AAA_16|PF13191.2|1.5e-05,AAA_16|PF13191.2|8.1e+02,AAA_5|PF07728.10|9.8e-06 S_Transcript_18080:924-1832(+)
MATALTERSNPAPMSTATTTNHGDGLRLYYLKRINEVEHLLRQKTLDLSRLEAHRNELNSRVRMLKEELMLLQEPGSYVGEVVKVMGKSKVLVKVHPEGKYVVDIDKSIDITKLTPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATN

Click here to download the sequence:
Link to NCBI Protein BLAST