Transcript Information: S_Transcript_180912.p1


Annotated TAIR IDAT1G21065.1
Annotated Gene Nameunknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0047 (InterPro:IPR001602); Has 3800 Blast hits to 3784 proteins in 1137 species: Archae - 215; Bacteria - 2154; Metazoa - 42; Fungi - 99; Plants - 99; Viruses - 0; Other Eukaryotes - 1191 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:7374210-7375644 | Forward length=217
E-Value3E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1079604938757
Replicate 20.87377384386197
Replicate 32.5564188630733
Condition 2: 8 Hour
Replicate 11.4779973487122
Replicate 21.1075172593924
Replicate 31.0552399804446
Condition 3: 24 Hour
Replicate 12.162859751544
Replicate 21.3463650441394
Replicate 31.9977856954547


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_180912.p1 GENE.S_Transcript_180912~~S_Transcript_180912.p1 ORF type:5prime_partial len:101 (+),score=4.22 S_Transcript_180912:3-305(+)
GAAGGACCGGATGACATGCCAGCTCATATTAAGTCATCAATGATTCCAATCACTGATGGAAAGCTTAACATGGGAACTTGGCAGTTCCTCACTGGTGGGCTCCGCCCGGACCGGCGTTCAACGCCGGCGTCCCCACTGTCATCGTCGTCACCAGTAGCGGCCACATCTGTCAGGGCTCTCAGCCCCTCTTCCTCTCGCCTCTTTCGTCTCATCCTGTCCCTTCACCGAATGTTTCACCGGCGTTCGACGCCCAGACCGGCGTTTATCGCCGCCGTCCTCACCGCCATCGTCACCGGCGCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_180912.p1 GENE.S_Transcript_180912~~S_Transcript_180912.p1 ORF type:5prime_partial len:101 (+),score=4.22 S_Transcript_180912:3-305(+)
EGPDDMPAHIKSSMIPITDGKLNMGTWQFLTGGLRPDRRSTPASPLSSSSPVAATSVRALSPSSSRLFRLILSLHRMFHRRSTPRPAFIAAVLTAIVTGA*

Click here to download the sequence:
Link to NCBI Protein BLAST