Transcript Information: S_Transcript_180928.p1


Annotated TAIR IDAT1G09220.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:2977952-2979466 | Reverse length=504
E-Value1E-87
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.20577062810707
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.1300105381707


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_180928.p1 GENE.S_Transcript_180928~~S_Transcript_180928.p1 ORF type:complete len:388 (-),score=74.70,PPR|PF01535.16|24,PPR|PF01535.16|5.7e-05,PPR|PF01535.16|0.00018,PPR|PF01535.16|6.3e-06,PPR|PF01535.16|0.0012,PPR|PF01535.16|0.23,PPR|PF01535.16|4.9,PPR|PF01535.16|4.4e+02,PPR_2|PF13041.2|3.3e+02,PPR_2|PF13041.2|4.7e-06,PPR_2|PF13041.2|0.0053,PPR_2|PF13041.2|1.7e-09,PPR_2|PF13041.2|2.3,PPR_2|PF13041.2|12,PPR_2|PF13041.2|1.2e+02,PPR_2|PF13041.2|2.4e+03,PPR_1|PF12854.3|7e+02,PPR_1|PF12854.3|0.093,PPR_1|PF12854.3|1.3e+03,PPR_1|PF12854.3|0.0027,PPR_1|PF12854.3|0.0015,PPR_1|PF12854.3|0.0075,PPR_1|PF12854.3|0.18,PPR_1|PF12854.3|7e+03,PPR_3|PF13812.2|6.9,PPR_3|PF13812.2|0.15,PPR_3|PF13812.2|0.0052,PPR_3|PF13812.2|0.55,PPR_3|PF13812.2|26,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|1.5e+03 S_Transcript_180928:702-1865(-)
ATGTTTGATACTGCAGCTGGTGCAACAAAGCAATTCTTCCACAAGTACAGGATCAAACAGAGTTCTGAGAGAAGCCTGCATGGTGAATCTCTCATCTTAATGAATCTTTGCTGGTGTCATACTGCTCAACCTTGGTTAGACAGTGACTTATATCTCTCTTCCTCTTTCTTAGTGCTTAATGAACCCATTGTGGTTAGTGGGGTACTTGATATGTTGCCGTATTCATTTCTTCAGATGATTGTCAACATATTCCTGCCTTTACTGACACTCGAGGATGCTCTTGCTTTGTTTTGGGAGATGCCCAGTAGGAATATAGTTTCTTGGACTGGTATGATTGATGGGTGCACACAGTTGAAAAATTATGCTGAGGCATATTCACTGTTTCGGAAGATGGCAATGGCTGCAGGCATTATGCCTACTGACGTAACATTCCTAGCCATTTTTCCTGCTATCACGGATCTTGGGGATGTCAAGAATTGCCAGTTGATCCATGCAAATGGATTCAAAAGAGGAATCAATGTGAGTGAGACCCGGGTCACAAACAACCTCATTGATACCTATGCCAAGTGTGGATGTGTTCGAAGTGCATTCCAAGTATTCAAGGAGATGCCTGCTAATAGAAGGGATTTGGTGTCTTGGACGTCAATCATATCTGGATTTGCTATGCATGGTATGGCAAAAGATGCCACAGAGAGTTTCAGGCGGATGGAGAGTTTAGGCTTCAAACCAAACCGAGTTACCTTCTTGAGTGTTCTCAATGCTTGTAGTCATGGAGGATTAGTGGAAGAGGGGTTCCAATTCTTCAGAAGAATGCCTGATTTCCAGATTGTGCCAGAGCTAAAGTATTATGGATGTGTGATTGATATGTTGGGGAGAGCAGGCAGATTGAAAGAAGCAGAGGAGATCGCTTGTCATATCCCTGACCATATTGATAATGTAATAATTTGGCGAACACTTTTGGGTGCTTGTAGCTTGCATGGTGATGCTGAGATTGCTGAGCGTGTAACCAAGAGGTTACAGCAAATGGAGAGTGGATATGGCGGGGACTATGTTTTGATGTCGAACATATTAACAGGTCATGGAAAGTTCAGCGATGCTGAGAATGTGAGGCTGTTGATGGACAATAGGAATGTTCCCAAGATCCCTGCCCACAGCTCAGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_180928.p1 GENE.S_Transcript_180928~~S_Transcript_180928.p1 ORF type:complete len:388 (-),score=74.70,PPR|PF01535.16|24,PPR|PF01535.16|5.7e-05,PPR|PF01535.16|0.00018,PPR|PF01535.16|6.3e-06,PPR|PF01535.16|0.0012,PPR|PF01535.16|0.23,PPR|PF01535.16|4.9,PPR|PF01535.16|4.4e+02,PPR_2|PF13041.2|3.3e+02,PPR_2|PF13041.2|4.7e-06,PPR_2|PF13041.2|0.0053,PPR_2|PF13041.2|1.7e-09,PPR_2|PF13041.2|2.3,PPR_2|PF13041.2|12,PPR_2|PF13041.2|1.2e+02,PPR_2|PF13041.2|2.4e+03,PPR_1|PF12854.3|7e+02,PPR_1|PF12854.3|0.093,PPR_1|PF12854.3|1.3e+03,PPR_1|PF12854.3|0.0027,PPR_1|PF12854.3|0.0015,PPR_1|PF12854.3|0.0075,PPR_1|PF12854.3|0.18,PPR_1|PF12854.3|7e+03,PPR_3|PF13812.2|6.9,PPR_3|PF13812.2|0.15,PPR_3|PF13812.2|0.0052,PPR_3|PF13812.2|0.55,PPR_3|PF13812.2|26,PPR_3|PF13812.2|1.2e+02,PPR_3|PF13812.2|1.5e+03 S_Transcript_180928:702-1865(-)
MFDTAAGATKQFFHKYRIKQSSERSLHGESLILMNLCWCHTAQPWLDSDLYLSSSFLVLNEPIVVSGVLDMLPYSFLQMIVNIFLPLLTLEDALALFWEMPSRNIVSWTGMIDGCTQLKNYAEAYSLFRKMAMAAGIMPTDVTFLAIFPAITDLGDVKNCQLIHANGFKRGINVSETRVTNNLIDTYAKCGCVRSAFQVFKEMPANRRDLVSWTSIISGFAMHGMAKDATESFRRMESLGFKPNRVTFLSVLNACSHGGLVEEGFQFFRRMPDFQIVPELKYYGCVIDMLGRAGRLKEAEEIACHIPDHIDNVIIWRTLLGACSLHGDAEIAERVTKRLQQMESGYGGDYVLMSNILTGHGKFSDAENVRLLMDNRNVPKIPAHSSA*

Click here to download the sequence:
Link to NCBI Protein BLAST