Transcript Information: S_Transcript_180932.p1


Annotated TAIR IDAT1G09220.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:2977952-2979466 | Reverse length=504
E-Value3.5E-153
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.044843068206331
Replicate 30.074970471884555
Condition 2: 8 Hour
Replicate 10.17337715704986
Replicate 20.22735618536308
Replicate 30.2166244675303
Condition 3: 24 Hour
Replicate 10.04440016969633
Replicate 20.046064657675503
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_180932.p1 GENE.S_Transcript_180932~~S_Transcript_180932.p1 ORF type:complete len:492 (-),score=61.87,PPR|PF01535.16|2.7,PPR|PF01535.16|48,PPR|PF01535.16|0.075,PPR|PF01535.16|3e-07,PPR|PF01535.16|7.7e-05,PPR|PF01535.16|0.00025,PPR|PF01535.16|8.6e-06,PPR|PF01535.16|0.0016,PPR|PF01535.16|0.31,PPR|PF01535.16|6.6,PPR|PF01535.16|6e+02,PPR_2|PF13041.2|7.9e-06,PPR_2|PF13041.2|0.19,PPR_2|PF13041.2|3.2e-06,PPR_2|PF13041.2|6.5e-06,PPR_2|PF13041.2|0.0071,PPR_2|PF13041.2|2.4e-09,PPR_2|PF13041.2|0.8,PPR_2|PF13041.2|16,PPR_2|PF13041.2|1.7e+02,PPR_2|PF13041.2|3.2e+03,PPR_1|PF12854.3|6.5e+03,PPR_1|PF12854.3|1.5e+02,PPR_1|PF12854.3|48,PPR_1|PF12854.3|0.0036,PPR_1|PF12854.3|0.12,PPR_1|PF12854.3|1.7e+03,PPR_1|PF12854.3|0.0036,PPR_1|PF12854.3|0.0021,PPR_1|PF12854.3|0.01,PPR_1|PF12854.3|0.24,PPR_3|PF13812.2|5.4e+02,PPR_3|PF13812.2|20,PPR_3|PF13812.2|7.4,PPR_3|PF13812.2|0.1,PPR_3|PF13812.2|9.4,PPR_3|PF13812.2|0.2,PPR_3|PF13812.2|0.0071,PPR_3|PF13812.2|0.75,PPR_3|PF13812.2|34,PPR_3|PF13812.2|1.6e+02,PPR_3|PF13812.2|2e+03 S_Transcript_180932:702-2177(-)
ATGCGAAGTTTAATATTAAGACGCCCCATAATCTGCTATCCCCAGATTACACTATTCCCATATTCCTTTGCGTCATTTTCATCCTATAACCATTCCTTTCAACATTACCACCGACAAGACTTTCTTTCTCTTCTAATAAACTACCCATTATCACATAATATAAACCTTCAAGTCCACTCTCAGTTGACAACCAGTGGCTTATTGAACCAATTCACAAATACCCAGATCATATTTGTCTTCAATACCCTTTTGAGACACTATGCACTTGGTGAATTCCCCCAAAAAGCTTTCTCTCTCTACAAACAAGCTCAAAGTTTGACCTTGTACTTTGATAGTTTTACATACTCTTTTCTCATCAAAGCCTGTGCTAAACTGAACCATCGATTTGCGGGTTTTCAGTTCCATGCCCATGTAGTGAATTTGGGATTTGAATGGCATGTCTATGTACAGACCGCATTGCTCAACATGTATGTTGATTTTGGGTTGTTGAGTAAAGCACAGAAGGTGTTTGTTCAAATGCCTGACAGAAATATAGTTACTTGGAATGTCATGGTTACTGGGTTAGTTAAATGGGGTTACCTCGAGGATGCTCTTGCTTTGTTTTGGGAGATGCCCAGTAGGAATATAGTTTCTTGGACTGGTATGATTGATGGGTGCACACAGTTGAAAAATTATGCTGAGGCATATTCACTGTTTCGGAAGATGGCAATGGCTGCAGGCATTATGCCTACTGACGTAACATTCCTAGCCATTTTTCCTGCTATCACGGATCTTGGGGATGTCAAGAATTGCCAGTTGATCCATGCAAATGGATTCAAAAGAGGAATCAATGTGAGTGAGACCCGGGTCACAAACAACCTCATTGATACCTATGCCAAGTGTGGATGTGTTCGAAGTGCATTCCAAGTATTCAAGGAGATGCCTGCTAATAGAAGGGATTTGGTGTCTTGGACGTCAATCATATCTGGATTTGCTATGCATGGTATGGCAAAAGATGCCACAGAGAGTTTCAGGCGGATGGAGAGTTTAGGCTTCAAACCAAACCGAGTTACCTTCTTGAGTGTTCTCAATGCTTGTAGTCATGGAGGATTAGTGGAAGAGGGGTTCCAATTCTTCAGAAGAATGCCTGATTTCCAGATTGTGCCAGAGCTAAAGTATTATGGATGTGTGATTGATATGTTGGGGAGAGCAGGCAGATTGAAAGAAGCAGAGGAGATCGCTTGTCATATCCCTGACCATATTGATAATGTAATAATTTGGCGAACACTTTTGGGTGCTTGTAGCTTGCATGGTGATGCTGAGATTGCTGAGCGTGTAACCAAGAGGTTACAGCAAATGGAGAGTGGATATGGCGGGGACTATGTTTTGATGTCGAACATATTAACAGGTCATGGAAAGTTCAGCGATGCTGAGAATGTGAGGCTGTTGATGGACAATAGGAATGTTCCCAAGATCCCTGCCCACAGCTCAGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_180932.p1 GENE.S_Transcript_180932~~S_Transcript_180932.p1 ORF type:complete len:492 (-),score=61.87,PPR|PF01535.16|2.7,PPR|PF01535.16|48,PPR|PF01535.16|0.075,PPR|PF01535.16|3e-07,PPR|PF01535.16|7.7e-05,PPR|PF01535.16|0.00025,PPR|PF01535.16|8.6e-06,PPR|PF01535.16|0.0016,PPR|PF01535.16|0.31,PPR|PF01535.16|6.6,PPR|PF01535.16|6e+02,PPR_2|PF13041.2|7.9e-06,PPR_2|PF13041.2|0.19,PPR_2|PF13041.2|3.2e-06,PPR_2|PF13041.2|6.5e-06,PPR_2|PF13041.2|0.0071,PPR_2|PF13041.2|2.4e-09,PPR_2|PF13041.2|0.8,PPR_2|PF13041.2|16,PPR_2|PF13041.2|1.7e+02,PPR_2|PF13041.2|3.2e+03,PPR_1|PF12854.3|6.5e+03,PPR_1|PF12854.3|1.5e+02,PPR_1|PF12854.3|48,PPR_1|PF12854.3|0.0036,PPR_1|PF12854.3|0.12,PPR_1|PF12854.3|1.7e+03,PPR_1|PF12854.3|0.0036,PPR_1|PF12854.3|0.0021,PPR_1|PF12854.3|0.01,PPR_1|PF12854.3|0.24,PPR_3|PF13812.2|5.4e+02,PPR_3|PF13812.2|20,PPR_3|PF13812.2|7.4,PPR_3|PF13812.2|0.1,PPR_3|PF13812.2|9.4,PPR_3|PF13812.2|0.2,PPR_3|PF13812.2|0.0071,PPR_3|PF13812.2|0.75,PPR_3|PF13812.2|34,PPR_3|PF13812.2|1.6e+02,PPR_3|PF13812.2|2e+03 S_Transcript_180932:702-2177(-)
MRSLILRRPIICYPQITLFPYSFASFSSYNHSFQHYHRQDFLSLLINYPLSHNINLQVHSQLTTSGLLNQFTNTQIIFVFNTLLRHYALGEFPQKAFSLYKQAQSLTLYFDSFTYSFLIKACAKLNHRFAGFQFHAHVVNLGFEWHVYVQTALLNMYVDFGLLSKAQKVFVQMPDRNIVTWNVMVTGLVKWGYLEDALALFWEMPSRNIVSWTGMIDGCTQLKNYAEAYSLFRKMAMAAGIMPTDVTFLAIFPAITDLGDVKNCQLIHANGFKRGINVSETRVTNNLIDTYAKCGCVRSAFQVFKEMPANRRDLVSWTSIISGFAMHGMAKDATESFRRMESLGFKPNRVTFLSVLNACSHGGLVEEGFQFFRRMPDFQIVPELKYYGCVIDMLGRAGRLKEAEEIACHIPDHIDNVIIWRTLLGACSLHGDAEIAERVTKRLQQMESGYGGDYVLMSNILTGHGKFSDAENVRLLMDNRNVPKIPAHSSA*

Click here to download the sequence:
Link to NCBI Protein BLAST