Transcript Information: S_Transcript_18105.p1


Annotated TAIR IDAT1G67360.2
Annotated Gene NameRubber elongation factor protein (REF)
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:25237072-25237913 | Reverse length=240
E-Value2.6E-64
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1506.06945205946
Replicate 2607.36875168122
Replicate 3667.54898173498
Condition 2: 8 Hour
Replicate 1267.75212287067
Replicate 2244.90663934177
Replicate 3261.09093759541
Condition 3: 24 Hour
Replicate 1715.79557384788
Replicate 2692.50535372173
Replicate 3643.62920722685


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_18105.p1 GENE.S_Transcript_18105~~S_Transcript_18105.p1 ORF type:3prime_partial len:189 (+),score=45.45,REF|PF05755.8|9.2e-68 S_Transcript_18105:1605-2168(+)
ATGGAGAACAGTGATGAAACAAAGAGAACTCAGCAAGAATTGAAGCATTTGGGATTTGTAAGAGCTGCAGCAATTAATACAATAGTTTGGTTATCAGGATTGTATGATTATGCAAAGCAGAATTCAGGGCCTCTAAGATCAGCTGTTGGGACTGTTGAAAATGCTGTTACTACGGTTGTTACTCCTGTTTACCATAAATTCAAGGATGTTCCTGATCATCTCCTTGTTTTCCTTGATCAAAAGGTAGACGTGGCCAGTGCCAAATTCGACGAGCATGCTCCAACATTGGCCAAGGAAGTTGCTAGCCATGTCCACAATGCAATTGAGAAAACAGCCCAAATGGCTAAAGATCTTGCTCACCAGGCCCAAGTAGGCGGACCAGTTGCAGCAGCCCATTACGCAGCACAGGTATCAAAGGTGATGGTGCTCGATCAGTCCGTCAAGGTGTGGTCGAAGCTCGATAAACTCCCTCCATTCCACATGGTGGCCGAGATGACAGTCCCTACAGCCGCTCACTGGTCAGAATGGTACAACAAACTGGTCACTGACATGCAAGGAAAGGGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_18105.p1 GENE.S_Transcript_18105~~S_Transcript_18105.p1 ORF type:3prime_partial len:189 (+),score=45.45,REF|PF05755.8|9.2e-68 S_Transcript_18105:1605-2168(+)
MENSDETKRTQQELKHLGFVRAAAINTIVWLSGLYDYAKQNSGPLRSAVGTVENAVTTVVTPVYHKFKDVPDHLLVFLDQKVDVASAKFDEHAPTLAKEVASHVHNAIEKTAQMAKDLAHQAQVGGPVAAAHYAAQVSKVMVLDQSVKVWSKLDKLPPFHMVAEMTVPTAAHWSEWYNKLVTDMQGKG

Click here to download the sequence:
Link to NCBI Protein BLAST