Transcript Information: S_Transcript_181195.p1


Annotated TAIR IDAT5G44200.1
Annotated Gene NameCAP-binding protein 20
Annotated Gene Symbol(s)CBP20, ATCBP20
Annotation TypeOrtholog
Chromosome Positionchr5:17802062-17803875 | Reverse length=257
E-Value1.6E-93
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.611706746172
Replicate 214.420123893801
Replicate 316.996246979004
Condition 2: 8 Hour
Replicate 116.447033055044
Replicate 221.64074247503
Replicate 315.882396254692
Condition 3: 24 Hour
Replicate 112.849931465055
Replicate 215.405466692419
Replicate 315.990446452917


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_181195.p1 GENE.S_Transcript_181195~~S_Transcript_181195.p1 ORF type:complete len:153 (+),score=21.40,RRM_1|PF00076.18|4.6e-14,RRM_6|PF14259.2|1.7e-08,RRM_5|PF13893.2|7.2e+03,RRM_5|PF13893.2|6.4e-08 S_Transcript_181195:163-621(+)
ATGGCTTTGTTGTTCAAGGATCCAAGCAAGCTCTCAGCTTACCGAGATAGAAGATTTCCGGGAAACCAAGAAGAATTTGAGGAAGCACTAAAGAACTCAACTACTGTCTATATAGGGAACATGTCTTTCTACACAACAGAAGAGCAAGTTTATGAGCTATTTTCTCGTGTTGGAGAAATTAAAAAGATGATCATGGGCTTGGATAAAAACACAAAAACCCCTTGCGGCTTTTGTTTCGTGTTGTATTACTCTAGAGAAGACACCGAGGATGCTGTCAAGTATATAAGTGGAACGATTCTTGATGACCGCCCTATCCGTGTAGACTTTGACTGGGGATTTCAAGAAGGGAGGCAATGGGGACGTGGTCGAAGTGGCGGTCAGGTAAGGGATGAATACCGTACAGACTATGATCCTGATATCCTTCTTATGATTGCTTTTTTAGATCTCTTTATATCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_181195.p1 GENE.S_Transcript_181195~~S_Transcript_181195.p1 ORF type:complete len:153 (+),score=21.40,RRM_1|PF00076.18|4.6e-14,RRM_6|PF14259.2|1.7e-08,RRM_5|PF13893.2|7.2e+03,RRM_5|PF13893.2|6.4e-08 S_Transcript_181195:163-621(+)
MALLFKDPSKLSAYRDRRFPGNQEEFEEALKNSTTVYIGNMSFYTTEEQVYELFSRVGEIKKMIMGLDKNTKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQEGRQWGRGRSGGQVRDEYRTDYDPDILLMIAFLDLFIS*

Click here to download the sequence:
Link to NCBI Protein BLAST