Transcript Information: S_Transcript_181196.p1


Annotated TAIR IDAT5G44200.1
Annotated Gene NameCAP-binding protein 20
Annotated Gene Symbol(s)CBP20, ATCBP20
Annotation TypeOrtholog
Chromosome Positionchr5:17802062-17803875 | Reverse length=257
E-Value5.8E-141
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 138.928037100872
Replicate 233.829610654856
Replicate 333.920169502779
Condition 2: 8 Hour
Replicate 134.538769415592
Replicate 235.619492344035
Replicate 336.780286063497
Condition 3: 24 Hour
Replicate 125.956861559412
Replicate 227.107696199161
Replicate 327.39806392242


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_181196.p1 GENE.S_Transcript_181196~~S_Transcript_181196.p1 ORF type:complete len:255 (+),score=50.42,RRM_1|PF00076.18|1.4e-13,RRM_6|PF14259.2|5e-08,RRM_5|PF13893.2|1.8e-07 S_Transcript_181196:289-1053(+)
ATGGAACCTCTTCCCCCAGGCCTGGTGGATCCAAGCAAGCTCTCAGCTTACCGAGATAGAAGATTTCCGGGAAACCAAGAAGAATTTGAGGAAGCACTAAAGAACTCAACTACTGTCTATATAGGGAACATGTCTTTCTACACAACAGAAGAGCAAGTTTATGAGCTATTTTCTCGTGTTGGAGAAATTAAAAAGATGATCATGGGCTTGGATAAAAACACAAAAACCCCTTGCGGCTTTTGTTTCGTGTTGTATTACTCTAGAGAAGACACCGAGGATGCTGTCAAGTATATAAGTGGAACGATTCTTGATGACCGCCCTATCCGTGTAGACTTTGACTGGGGATTTCAAGAAGGGAGGCAATGGGGACGTGGTCGAAGTGGCGGTCAGGTAAGGGATGAATACCGTACAGACTATGATCCTGGCAGAGGTGGTTACGGAAAATTGGTTCAAAAAGAGCTAGACGCCCGACAACTTGTAGACTATGGTACTGGTTCGCTTGGAGCTTTTGCACCAGTTATGCCGGCTCAATATGGTAGGCATGAAAGGAACCGTGGACATGGAGGTTCTTATCGATACAGTAGAGATCATTATAGGAAGAGACCTCGTGAGGATGACCGTAAACCTGCTGAGATGTCAAAGAGAAGTGAGCATGAATCACGTAGAAACTCTGACCATGAATCTAGACCGGAGAAAAACCCTCGTTTCCGTGAAAGTGGTGACTCTGATGATGATGAAGATGATGACAGAAAACGCCGTAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_181196.p1 GENE.S_Transcript_181196~~S_Transcript_181196.p1 ORF type:complete len:255 (+),score=50.42,RRM_1|PF00076.18|1.4e-13,RRM_6|PF14259.2|5e-08,RRM_5|PF13893.2|1.8e-07 S_Transcript_181196:289-1053(+)
MEPLPPGLVDPSKLSAYRDRRFPGNQEEFEEALKNSTTVYIGNMSFYTTEEQVYELFSRVGEIKKMIMGLDKNTKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQEGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELDARQLVDYGTGSLGAFAPVMPAQYGRHERNRGHGGSYRYSRDHYRKRPREDDRKPAEMSKRSEHESRRNSDHESRPEKNPRFRESGDSDDDEDDDRKRRN*

Click here to download the sequence:
Link to NCBI Protein BLAST