Transcript Information: S_Transcript_181200.p1


Annotated TAIR IDAT5G44200.1
Annotated Gene NameCAP-binding protein 20
Annotated Gene Symbol(s)CBP20, ATCBP20
Annotation TypeOrtholog
Chromosome Positionchr5:17802062-17803875 | Reverse length=257
E-Value5.4E-127
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.1760371844454
Replicate 22.4514210619461
Replicate 33.5671135634948
Condition 2: 8 Hour
Replicate 17.8105339021598
Replicate 22.39369573923
Replicate 33.8596596486386
Condition 3: 24 Hour
Replicate 12.9665891160066
Replicate 22.238401143343
Replicate 32.698654956926


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_181200.p1 GENE.S_Transcript_181200~~S_Transcript_181200.p1 ORF type:complete len:243 (+),score=36.46,RRM_1|PF00076.18|1.3e-13,RRM_6|PF14259.2|4.5e-08,RRM_5|PF13893.2|1.6e-07 S_Transcript_181200:157-885(+)
ATGGCTTTGTTGTTCAAGGATCCAAGCAAGCTCTCAGCTTACCGAGATAGAAGATTTCCGGGAAACCAAGAAGAATTTGAGGAAGCACTAAAGAACTCAACTACTGTCTATATAGGGAACATGTCTTTCTACACAACAGAAGAGCAAGTTTATGAGCTATTTTCTCGTGTTGGAGAAATTAAAAAGATGATCATGGGCTTGGATAAAAACACAAAAACCCCTTGCGGCTTTTGTTTCGTGTTGTATTACTCTAGAGAAGACACCGAGGATGCTGTCAAGTATATAAGTGGAACGATTCTTGATGACCGCCCTATCCGTGTAGACTTTGACTGGGGATTTCAAGAAGGGAGGCAATGGGGACGTGGTCGAAGTGGCGGTCAGGTAAGGGATGAATACCGTACAGACTATGATCCTGGCAGAGGTGGTTACGGAAAATTGGTTCAAAAAGAGCTAGACGCCCGACAACTTGTAGACTATGGTACTGGTTCGCTTGGAGCTTTTGCACCAGTTATGCCGGCTCAATATGGTAGGCATGAAAGGAACCGTGGACATGGAGGTTCTTATCGATACAGTAGAGATCATTATAGGAAGAGACCTCGTGAGGATGACCGTAAACCTGCTGAGATGTCAAAGAGAAGTGAGCATGAATCACGTAGAAACTCTGACCATGAATCTAGACCGGTGGGTTTCAAATTTCGTGTACTATTGACACTACTATGTTATCCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_181200.p1 GENE.S_Transcript_181200~~S_Transcript_181200.p1 ORF type:complete len:243 (+),score=36.46,RRM_1|PF00076.18|1.3e-13,RRM_6|PF14259.2|4.5e-08,RRM_5|PF13893.2|1.6e-07 S_Transcript_181200:157-885(+)
MALLFKDPSKLSAYRDRRFPGNQEEFEEALKNSTTVYIGNMSFYTTEEQVYELFSRVGEIKKMIMGLDKNTKTPCGFCFVLYYSREDTEDAVKYISGTILDDRPIRVDFDWGFQEGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELDARQLVDYGTGSLGAFAPVMPAQYGRHERNRGHGGSYRYSRDHYRKRPREDDRKPAEMSKRSEHESRRNSDHESRPVGFKFRVLLTLLCYP*

Click here to download the sequence:
Link to NCBI Protein BLAST