Transcript Information: S_Transcript_181491.p1


Annotated TAIR IDAT4G30700.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:14962617-14964995 | Reverse length=792
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.97941248200537
Replicate 21.17593548403
Replicate 31.4276737323599
Condition 2: 8 Hour
Replicate 12.6521424506079
Replicate 23.1229737948857
Replicate 32.8673602108224
Condition 3: 24 Hour
Replicate 11.0811554011842
Replicate 21.2654920169534
Replicate 31.3763298342893


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_181491.p1 GENE.S_Transcript_181491~~S_Transcript_181491.p1 ORF type:complete len:788 (+),score=104.00,PPR|PF01535.16|12,PPR|PF01535.16|9.5e+03,PPR|PF01535.16|4.3,PPR|PF01535.16|7.4e-05,PPR|PF01535.16|8.9,PPR|PF01535.16|0.0013,PPR|PF01535.16|8.1,PPR|PF01535.16|2e-09,PPR|PF01535.16|82,PPR|PF01535.16|0.0017,PPR|PF01535.16|4e-09,PPR|PF01535.16|0.042,PPR|PF01535.16|0.064,PPR|PF01535.16|8.7e+03,PPR_2|PF13041.2|0.085,PPR_2|PF13041.2|3.6,PPR_2|PF13041.2|1.3e-05,PPR_2|PF13041.2|1.8e+02,PPR_2|PF13041.2|0.002,PPR_2|PF13041.2|1e+03,PPR_2|PF13041.2|4.1e-13,PPR_2|PF13041.2|0.035,PPR_2|PF13041.2|1e-12,PPR_2|PF13041.2|1.6,PPR_2|PF13041.2|3.1,PPR_2|PF13041.2|1.4e+04,DYW_deaminase|PF14432.2|5.9e-41,PPR_1|PF12854.3|45,PPR_1|PF12854.3|6.6e+02,PPR_1|PF12854.3|1.4e+02,PPR_1|PF12854.3|1.9,PPR_1|PF12854.3|16,PPR_1|PF12854.3|0.00071,PPR_1|PF12854.3|74,PPR_1|PF12854.3|0.00018,PPR_1|PF12854.3|3.3e+02,PPR_1|PF12854.3|0.088,PPR_1|PF12854.3|0.00015,PPR_1|PF12854.3|93,PPR_1|PF12854.3|0.41,PPR_3|PF13812.2|1.1e+04,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|5.7e+02,PPR_3|PF13812.2|48,PPR_3|PF13812.2|15,PPR_3|PF13812.2|82,PPR_3|PF13812.2|0.057,PPR_3|PF13812.2|4.6e+03,PPR_3|PF13812.2|0.0056,PPR_3|PF13812.2|0.0089,PPR_3|PF13812.2|6.3,PPR_3|PF13812.2|1.3 S_Transcript_181491:162-2525(+)
ATGTTTAACAGAGCCTTAACAGCTTCATCAAAATGTGATCGAAACTTCTTTCTCAACCTCATCTCTAAATCAAAAACCTTCGCAAACCTTAAACAAATCCAAGCTCAAATCTTTCTCAACAGTCTAAATTCAGACATAATAACAGTCACCAAACTCGCACAAAAGCTTTGTGACATAGGAGCTATAGACCATGCTAACCTTCTTGTCTCTTCAACACCAAGTCCTGATCTTTTCCTCCATAATGTCCTCATCAAAGGGTTTTCTCTCAATAATTTACCCTTATCTTCTGTCTCAGTTTATTCCCAATTACGCCGAAAAACAACCCTTAAACCTGATAATTTCACTTATGCTTTCGCTATCTCGGCTTCCGGGTCACTTGGGCATGAAAAGATTGGGATGTTACTTCATGCCCACTCAATTATTGATGGGTATGGTGCAAATTTGTTTGTTGGGTCTGTTGTTATTGACATGTACCTTAGTTTTTCCAAAGTTGGGTATGCATATAAGGTGTTCGATAGAATGCCTAAAAGAGACACAGTTTTGTGGAATACTATGATATCTGGGTTAGTCAAGAATTGTTGTTACATTGATTCTATGAGGGTGTTCAAGGATATGATTGGAAGTAACACTCAATTTGATTCGTCAACTTTGTCTGCTATACTTCCTACAGTTGCGGAGTTGCAGGATTGGAATGTGGGTAAGGGAATTCAGTGCTTAGCTTTGAAAGCAGGTTTCGGTTCTCATGTTTATGTTCTCACTGGCTTGGTTTCATTCTATTCGAAATGTGGGGATGTATCAACAGCCAGAGTGCTGTTTGAGCAGCTAGATAAACCAGATTTGGTATGTTATAATGCAATTATTTCAGGTTATACACTAAATGGTGAGACAGAGTCTTCAGTAAGGTTATTTAAAGAATTTCTATCTGGAAAGAAGGTGAACTCCAGCACAATTGTTGGACTTATTCCGGTTGGATCTCCTTTTGGTCATTTGAATTTGAATTCATCCATCCATTGTTTATGTGTGAAAGCTGGGATGATAGCAAATCCTTCGGTTTCCACTGCATTGACTACTGTCTATTCTAGGCTGAATGAAATTGATAGGGCAAGACAACTATTTGATGAGTCACCAGAGAAAAGCTTGGCATGTTGGAATGCCATGATATCGGGGTATACTCAAAATGGGTTGACAGAAAAGGCGGTTTCACTGTTTCAGGAAATGCAAAAGTGTCGTGTTCATCCAAATCCTGTTACAGTTACAAGTATCCTGTCAGCATGTGCACAACTTGGAGCACTTAGTTTAGGAAAGTGGGTTCATGAATTAATAAACAAAGAAAAGTTGGAATCAAATGTATATGTATTAACTGCTTTGATTGACATGTATGCAAAATGTGGGAGTATATTGAAGGCTAGACAAACGTTTGATTCGATGCCAGAGAAAAATGTCGTGTCCTGGAATGTGATGATTTCTGGTTACGGCCTTCACGGGCATGGACATGAGGCACTAAATATATTTAACGAGATGTTGGAATCTGGCATTCGTCCCAGCGGGGTTACTTACCTCTGTATTCTTTATGCTTGTAGTCATGCGGGCTTAGTAAGTGAAGGAGATAAGATTTTCCATTCCATGGTCCATGATCATGGCTATGAACCAGTAGCTGAGCATTACGCTTGTATGGTAGATATCTTTGGTCGAGCAGGACAACTAGAGAAGGCTTTAAACTTCATTGAGAATATGCCTGTTAAACGTGGTCCTGTTGAGTGGGGAGCGTTACTCGGTGCATGCATGATTCACAAGGATACAAAACTGGCACGCTTAGCTTCTGACAAATTGCTTGAGTTAGACCCTGAAAATGTTGGATATTATGTCCTATTGTCCAACATTTATTCAGCTGATCGCAACTACTGGCAGGCTGCTTCTGTACGACAAGTGGCTAAGAAGAGAAGGTTGGCAAAGGCACCTGGGTGCACCCTAATAGAGTTGGGTGAAACTCCTTATGTCTTTACTTGCGGTGATCGGTCCCACCCACAAACAACTGCTATATACGCAAAGCTGGAGAGTTTGATGGCGAAAATGAAGGAGGCTGGATATCAGGCTGAGACTGAGACAGCTTTGCATGATGTTGAGGAGGAGGAGAAGGAGCTCATGGTAAATGTTCATAGTGAAAAATTGGCAATAGCTTTTGCCCTCATTTCTACAGAGCCAGGAACTGAAATCAGGATCTTCAAGAACCTCAGGGTTTGTTTAGACTGTCACAATGCAACAAAATTCATCTCCAAGATTACTGAACGAGTTATTATCGTTAGAGATACTAACAGATTCCATCATTTTAAAGACGGCAAGTGTTCTTGCGGAGACTACTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_181491.p1 GENE.S_Transcript_181491~~S_Transcript_181491.p1 ORF type:complete len:788 (+),score=104.00,PPR|PF01535.16|12,PPR|PF01535.16|9.5e+03,PPR|PF01535.16|4.3,PPR|PF01535.16|7.4e-05,PPR|PF01535.16|8.9,PPR|PF01535.16|0.0013,PPR|PF01535.16|8.1,PPR|PF01535.16|2e-09,PPR|PF01535.16|82,PPR|PF01535.16|0.0017,PPR|PF01535.16|4e-09,PPR|PF01535.16|0.042,PPR|PF01535.16|0.064,PPR|PF01535.16|8.7e+03,PPR_2|PF13041.2|0.085,PPR_2|PF13041.2|3.6,PPR_2|PF13041.2|1.3e-05,PPR_2|PF13041.2|1.8e+02,PPR_2|PF13041.2|0.002,PPR_2|PF13041.2|1e+03,PPR_2|PF13041.2|4.1e-13,PPR_2|PF13041.2|0.035,PPR_2|PF13041.2|1e-12,PPR_2|PF13041.2|1.6,PPR_2|PF13041.2|3.1,PPR_2|PF13041.2|1.4e+04,DYW_deaminase|PF14432.2|5.9e-41,PPR_1|PF12854.3|45,PPR_1|PF12854.3|6.6e+02,PPR_1|PF12854.3|1.4e+02,PPR_1|PF12854.3|1.9,PPR_1|PF12854.3|16,PPR_1|PF12854.3|0.00071,PPR_1|PF12854.3|74,PPR_1|PF12854.3|0.00018,PPR_1|PF12854.3|3.3e+02,PPR_1|PF12854.3|0.088,PPR_1|PF12854.3|0.00015,PPR_1|PF12854.3|93,PPR_1|PF12854.3|0.41,PPR_3|PF13812.2|1.1e+04,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|5.7e+02,PPR_3|PF13812.2|48,PPR_3|PF13812.2|15,PPR_3|PF13812.2|82,PPR_3|PF13812.2|0.057,PPR_3|PF13812.2|4.6e+03,PPR_3|PF13812.2|0.0056,PPR_3|PF13812.2|0.0089,PPR_3|PF13812.2|6.3,PPR_3|PF13812.2|1.3 S_Transcript_181491:162-2525(+)
MFNRALTASSKCDRNFFLNLISKSKTFANLKQIQAQIFLNSLNSDIITVTKLAQKLCDIGAIDHANLLVSSTPSPDLFLHNVLIKGFSLNNLPLSSVSVYSQLRRKTTLKPDNFTYAFAISASGSLGHEKIGMLLHAHSIIDGYGANLFVGSVVIDMYLSFSKVGYAYKVFDRMPKRDTVLWNTMISGLVKNCCYIDSMRVFKDMIGSNTQFDSSTLSAILPTVAELQDWNVGKGIQCLALKAGFGSHVYVLTGLVSFYSKCGDVSTARVLFEQLDKPDLVCYNAIISGYTLNGETESSVRLFKEFLSGKKVNSSTIVGLIPVGSPFGHLNLNSSIHCLCVKAGMIANPSVSTALTTVYSRLNEIDRARQLFDESPEKSLACWNAMISGYTQNGLTEKAVSLFQEMQKCRVHPNPVTVTSILSACAQLGALSLGKWVHELINKEKLESNVYVLTALIDMYAKCGSILKARQTFDSMPEKNVVSWNVMISGYGLHGHGHEALNIFNEMLESGIRPSGVTYLCILYACSHAGLVSEGDKIFHSMVHDHGYEPVAEHYACMVDIFGRAGQLEKALNFIENMPVKRGPVEWGALLGACMIHKDTKLARLASDKLLELDPENVGYYVLLSNIYSADRNYWQAASVRQVAKKRRLAKAPGCTLIELGETPYVFTCGDRSHPQTTAIYAKLESLMAKMKEAGYQAETETALHDVEEEEKELMVNVHSEKLAIAFALISTEPGTEIRIFKNLRVCLDCHNATKFISKITERVIIVRDTNRFHHFKDGKCSCGDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST