Transcript Information: S_Transcript_181611.p2


Annotated TAIR IDAT3G25720.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:9380234-9381405 | Forward length=282
E-Value5E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.29406631199094
Replicate 20.97515091966916
Replicate 30.50946784761328
Condition 2: 8 Hour
Replicate 10.11781983600626
Replicate 20.61800686850074
Replicate 30.35330134151903
Condition 3: 24 Hour
Replicate 10.60344982018216
Replicate 20.37564328579581
Replicate 30.69674155815238


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_181611.p2 GENE.S_Transcript_181611~~S_Transcript_181611.p2 ORF type:complete len:181 (+),score=25.66,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|1.8e-16 S_Transcript_181611:1866-2408(+)
ATGGGTGGTATGGGAATTGAGGCTTTGGCATGGAATAAATCTCTGAATGTGAGGTGGATTTGGAATATTACAAATCATGCTAACTCATTGTGGCTGGATTGGATACAACATTATTATTTGAAGAATCAAAATATTTGGGCTGTTAAAAGGAGAATTATTGATTCATGGACCTGGAAACAACTGTTGAGTCTTAGAGATGACCTGGTGACGAGAGCTGGTTCTATACAGAAAGTAGAAGAACTGATGGATAAGTGGTGCGTGAATGGGAAACTGAAAGTCAGCAGGATTTATGATTTGTTTATGGAAGAATCCCAGGGTGTATACAGTTCTAAGACTATATGGGATCATGCTGTCATGCCAAAGGATCAGGTTATTACCTGGTTGGCTTTTAAAAGAGCTCTGCCTACAGTGGATCTCCTCAACTCTAGGGGTTTAGTCATGGTGAATAGGTGTGAATTGTGTTGGCTTGATGTTAAGACTCATGGTCATTTGTTTTTTCAGTGCCCAGTTGCTCATGATATCTGGCAGTGTATCTCTTACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_181611.p2 GENE.S_Transcript_181611~~S_Transcript_181611.p2 ORF type:complete len:181 (+),score=25.66,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|1.8e-16 S_Transcript_181611:1866-2408(+)
MGGMGIEALAWNKSLNVRWIWNITNHANSLWLDWIQHYYLKNQNIWAVKRRIIDSWTWKQLLSLRDDLVTRAGSIQKVEELMDKWCVNGKLKVSRIYDLFMEESQGVYSSKTIWDHAVMPKDQVITWLAFKRALPTVDLLNSRGLVMVNRCELCWLDVKTHGHLFFQCPVAHDIWQCISY*

Click here to download the sequence:
Link to NCBI Protein BLAST