Transcript Information: S_Transcript_181646.p1


Annotated TAIR IDAT5G57370.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1777 (InterPro:IPR013957); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23244811-23245470 | Forward length=219
E-Value5.4E-69
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.337281471516
Replicate 25.561281665324
Replicate 38.8403197756102
Condition 2: 8 Hour
Replicate 16.6972300169509
Replicate 23.6053805659064
Replicate 33.2590345511748
Condition 3: 24 Hour
Replicate 15.1452824750573
Replicate 28.6159944835701
Replicate 35.6280594953565


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_181646.p1 GENE.S_Transcript_181646~~S_Transcript_181646.p1 ORF type:5prime_partial len:242 (+),score=18.11,DUF1777|PF08648.8|2.8e-27 S_Transcript_181646:1-726(+)
CTAAATTCTCTGAGATTTCTCTCTCCTTCACACCCCCACACACTCCCCCCTCAGTCCACTACAACCACAATGAGCGACCGTCACCGTGACCGTGACCGTGACCGTGATCGTGATCGCGATGACCGTGATCGCGACCGAGACCGAGACCACCGTGACAGACGTAGAGACAAAGACGACCGTGACCGAGACCGCCACCGTGACCGTATCCGGAGATCCCGCACACCAGACCGAACCCGGTCACGCCACGCCCGGCGGTCCAGGTCAATCTCCGGTTCACCTACCCGGTCGAGGTCTCGTTCCTTAGACCGTCCCCTCCGTCACCACCACCGCCGCCGTAGCCCCTCCCCCGACCACCGCCGTCGAAAGCGAGAAAGAGACGACCGCGACTACGATTACGACGAAAGAGACAGCAGAAAAGCCGTCTCGGATTTCGTCGACGGAATCGCCAAAGAGCACGAGCAACAGAAAAAGAAGAAGAAAACCTCCGAAAACCCTAACGTCGTAAATGGAACTGAGAAAATGGAGGAAGAAGGAGGAGAGGAAGATGATGAGATTGAGATGATGAAGAGGCTAGGGATTCCGGTAGGGTTTGATTCGACGAAAGGGAAGCCTGTTCCTGGTGCTGATGTTAGCGGTGTTAGGGCTGTTACTAAGAGACAACCTAGACAGTATATGAATCGTAGAGGTGGATTTAATCGTCCTTTGCCTCCTGAGCGCAATCGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_181646.p1 GENE.S_Transcript_181646~~S_Transcript_181646.p1 ORF type:5prime_partial len:242 (+),score=18.11,DUF1777|PF08648.8|2.8e-27 S_Transcript_181646:1-726(+)
LNSLRFLSPSHPHTLPPQSTTTTMSDRHRDRDRDRDRDRDDRDRDRDRDHRDRRRDKDDRDRDRHRDRIRRSRTPDRTRSRHARRSRSISGSPTRSRSRSLDRPLRHHHRRRSPSPDHRRRKRERDDRDYDYDERDSRKAVSDFVDGIAKEHEQQKKKKKTSENPNVVNGTEKMEEEGGEEDDEIEMMKRLGIPVGFDSTKGKPVPGADVSGVRAVTKRQPRQYMNRRGGFNRPLPPERNR*

Click here to download the sequence:
Link to NCBI Protein BLAST