Transcript Information: S_Transcript_181710.p1


Annotated TAIR IDAT2G17870.1
Annotated Gene Namecold shock domain protein 3
Annotated Gene Symbol(s)ATCSP3, CSP3
Annotation TypeOrtholog
Chromosome Positionchr2:7764276-7765181 | Reverse length=301
E-Value3.2E-75
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.89971789386
Replicate 225.471632579277
Replicate 320.500723801084
Condition 2: 8 Hour
Replicate 122.606744241768
Replicate 218.627204446811
Replicate 316.467178407282
Condition 3: 24 Hour
Replicate 123.532471056391
Replicate 223.150159464252
Replicate 321.325076170849


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_181710.p1 GENE.S_Transcript_181710~~S_Transcript_181710.p1 ORF type:complete len:233 (-),score=48.11,zf-CCHC|PF00098.19|2.3e-06,zf-CCHC|PF00098.19|5.6e-08,zf-CCHC|PF00098.19|4.5e-06,zf-CCHC|PF00098.19|2e-07,CSD|PF00313.18|1.2e-23,zf-CCHC_3|PF13917.2|5.5,zf-CCHC_3|PF13917.2|0.028,zf-CCHC_3|PF13917.2|0.085,zf-CCHC_3|PF13917.2|0.23 S_Transcript_181710:863-1561(-)
ATGGCGCAAGAGACTCGATCAACTGGAAGAGTAAGGTGGTTCAACGACATGAAGGGTTACGGCTTCATCGAGCCTGAAGATGGCGGTTCTGACCTTTTCGTTCACCAATCCTCCATCAAATCCGACGGTTACCGAACCCTAAGTGAAGGCGCTATCGTCGAGTTCACCTTCGCTGTTGGTGACGACAACAAACCCAAAGCTATTGATGTCACTGGCCCTAACGGATCTCCCATTCAGGATCCTCGCCGTGATAACTCCTTTTCCGGCTCCGGCTCTTGGAGATCAGGCAGTTTCGGCGGTGGCTGGAAGAGAGACAACGGAGGGGACTCGTTTGGATACAGCGGTGGTGCTGCTGGTGGAGGATGCTACCAGTGTGGAAGGCAAGGCCACCTGGCTAGAGACTGCCCAGAGAGCTCCTCTGGCAGGGGCGGCGGCGTTGGTGGTGGTGGTGGAAGCTGTTACAACTGCGGGCAGCCTGGGCACTTCGCTCGAGAATGCCGAGGTGTTGGCTCTGGCAGTGGTGGAGGTGGAGCGTGTTACAGCTGTGGAGGGTTTGGGCATATGGCCAGGGATTGTCGTCAAGCTGTCGCTGCCTCTACTGGTGGTGGATTCGGTGGTAGGTTTGGCGGCGGCGGTGGAGGGTGTTACAACTGTGGAGATCCTGGACACTTTGCTAGGGAATGCTCAAACAGGTCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_181710.p1 GENE.S_Transcript_181710~~S_Transcript_181710.p1 ORF type:complete len:233 (-),score=48.11,zf-CCHC|PF00098.19|2.3e-06,zf-CCHC|PF00098.19|5.6e-08,zf-CCHC|PF00098.19|4.5e-06,zf-CCHC|PF00098.19|2e-07,CSD|PF00313.18|1.2e-23,zf-CCHC_3|PF13917.2|5.5,zf-CCHC_3|PF13917.2|0.028,zf-CCHC_3|PF13917.2|0.085,zf-CCHC_3|PF13917.2|0.23 S_Transcript_181710:863-1561(-)
MAQETRSTGRVRWFNDMKGYGFIEPEDGGSDLFVHQSSIKSDGYRTLSEGAIVEFTFAVGDDNKPKAIDVTGPNGSPIQDPRRDNSFSGSGSWRSGSFGGGWKRDNGGDSFGYSGGAAGGGCYQCGRQGHLARDCPESSSGRGGGVGGGGGSCYNCGQPGHFARECRGVGSGSGGGGACYSCGGFGHMARDCRQAVAASTGGGFGGRFGGGGGGCYNCGDPGHFARECSNRS*

Click here to download the sequence:
Link to NCBI Protein BLAST