Transcript Information: S_Transcript_18191.p2


Annotated TAIR IDAT5G64040.2
Annotated Gene Namephotosystem I reaction center subunit PSI-N, chloroplast, putative / PSI-N, putative (PSAN)
Annotated Gene Symbol(s)PSAN
Annotation TypeOrtholog
Chromosome Positionchr5:25628690-25629409 | Reverse length=181
E-Value1.9E-58
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12651.8517207127
Replicate 22860.8518956413
Replicate 33082.6651413583
Condition 2: 8 Hour
Replicate 11405.3306033249
Replicate 21396.3210618452
Replicate 31496.6499862764
Condition 3: 24 Hour
Replicate 12798.4717607773
Replicate 22823.9913856492
Replicate 32893.8191776047


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_18191.p2 GENE.S_Transcript_18191~~S_Transcript_18191.p2 ORF type:complete len:169 (+),score=61.36,PsaN|PF05479.7|7.3e-67 S_Transcript_18191:369-875(+)
ATGGCTTCAATGAACTCTAGTGTTCTAGCATGCAGCTATGCCATTTCTGGGGCAGGAGCCTTGGAGCTGAGCTCAAAGGCTTCTTCTCTTGCACCTTCATCTGTTGGGTTTGCTGAGAAACTGCCCTTGATTAAGGCTCAAACCCAAAACTCAAGGGAAGAAAAGGGTAATGAAGGAAGAAGAGCTGCTCTTTTTGGCTTAGCTGCTGCCCTTGTGGCAACTTCCCTCAACACTTCCTCTGCTAATGCTGGGATCATTGAGGACTACCTTGAGAAGAGCAAAGCTAATAAGGAGTTGAATGACAAGAAGAGGTTGGCAACAAGTGGGGCCAACTTTGCAAGAGCATACACTGTGCAATTTGGAACCTGCAAATTCCCAGAGAACTTCACAGGCTGCCAAGATCTTGCCAAGCAAAAGAAAGTGCCATTCATCTCTGATGATCTGGATGTGGAATGTGAAGGCAAGGACAAGTACAAGTGCGGTTCTAATGTCTTTTGGAAATGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_18191.p2 GENE.S_Transcript_18191~~S_Transcript_18191.p2 ORF type:complete len:169 (+),score=61.36,PsaN|PF05479.7|7.3e-67 S_Transcript_18191:369-875(+)
MASMNSSVLACSYAISGAGALELSSKASSLAPSSVGFAEKLPLIKAQTQNSREEKGNEGRRAALFGLAAALVATSLNTSSANAGIIEDYLEKSKANKELNDKKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLDVECEGKDKYKCGSNVFWKW*

Click here to download the sequence:
Link to NCBI Protein BLAST