Transcript Information: S_Transcript_182138.p1


Annotated TAIR IDAT5G16640.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:5461031-5462545 | Forward length=504
E-Value3E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.20161364572106
Replicate 21.0028540707961
Replicate 31.9560477664425
Condition 2: 8 Hour
Replicate 11.1308919107571
Replicate 22.8812229308739
Replicate 32.7452227976112
Condition 3: 24 Hour
Replicate 11.6549154159541
Replicate 20.68678216898022
Replicate 31.7196848458034


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_182138.p1 GENE.S_Transcript_182138~~S_Transcript_182138.p1 ORF type:complete len:132 (+),score=18.95 S_Transcript_182138:373-768(+)
ATGAAGAATTCCTTGAAAGCTTCAATTGCAATTGCCTCCCATCAATTTCATGTCTCTTATTACGGTAACTTTCCCATCTTGTTTCAGATTTCTACTAGTAGCATTAATGGTTCTCATTGCTTTCCCTGTTTTCTTATTTCTCCTTCTTTATATTATTCTTCTACTGCTAATGCTAATGCTACCACAAGAAGAAGACCCCATCACCCTGAATTGTTCTTGAATTCTGTGAGGGAGCAATGCAAGCTAGGATTTAAGGACCTTGATTATCCAGTTGTTCTTTTCAATCAAATGACCTCTTTGCGTCCCCTTCCTTCCATTGTTGATTTCACTCGCCTCTTGTCCTCCATTCTTAAGATCAAGAAACCCCAAATGAAGTTGATAAATACCACCTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_182138.p1 GENE.S_Transcript_182138~~S_Transcript_182138.p1 ORF type:complete len:132 (+),score=18.95 S_Transcript_182138:373-768(+)
MKNSLKASIAIASHQFHVSYYGNFPILFQISTSSINGSHCFPCFLISPSLYYSSTANANATTRRRPHHPELFLNSVREQCKLGFKDLDYPVVLFNQMTSLRPLPSIVDFTRLLSSILKIKKPQMKLINTTL*

Click here to download the sequence:
Link to NCBI Protein BLAST