Transcript Information: S_Transcript_182333.p1


Annotated TAIR IDAT3G29270.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:11235326-11236117 | Forward length=263
E-Value9E-54
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.005822397037
Replicate 225.999644199748
Replicate 329.549513948074
Condition 2: 8 Hour
Replicate 133.375424994472
Replicate 230.522187549367
Replicate 328.606025968023
Condition 3: 24 Hour
Replicate 128.747541842641
Replicate 224.180349153947
Replicate 327.378576082877


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_182333.p1 GENE.S_Transcript_182333~~S_Transcript_182333.p1 ORF type:complete len:269 (+),score=21.35,zf-RING_UBOX|PF13445.2|3.3e-08,zf-RING_2|PF13639.2|1.6e+04,zf-RING_2|PF13639.2|2.8e-06,zf-RING_5|PF14634.2|7.4e+03,zf-RING_5|PF14634.2|5e-06 S_Transcript_182333:321-1127(+)
ATGTGGAGTTTCTCGAATTCGTTCTCGAATCTTCGGCTTCGGAAGGTCTATACTGAGCCAAACCTATGTTGCAGTGAACTGTCAGATGATGATGCTGGCTCGAGTTCATCAAGTAGAGAGGAAGGACTAGAGTGTCCAATATGTTGGGAGTCTTTTAATATTGTTGAGAATGTGCCATATGTCTTATGGTGTGGTCACACCTTGTGCCAAAATTGTGTTCTTGGGCTTCAATGGGCTATACTGAAACTCCCTGCTCAGAAGATTCAGCTCCCATTTTTCGTCTCCTGCCCTTGGTGCAACTTGTTATCTTTTCGGTTGGTCTATAGAGGAAACCTTAGGTTCCCTCGAAAGAATTACTTCATCCTTTGGATGATTGAGAGCTTGAATGGTGAACGTGCAAAGTCTGCATGTATGCTTCGTGGGGACAACCAATCAGTTTTGTCTCCCAGGAGAAGCTTGCTCACTCGGGGTTCTTCATCCAGCACTTATAGCCCTAGGAGGGTTCAACCTACGCATTTTCGAGGGCGGTTGGGGAGTAACCTTGATGATACTCAAATTAATAACCGTATCAATGTGGAAAGGCCGCAATTCTCGCTTCATAAGTCCCTTGATTACTTCATTCACCTTGTTGCCAAGTTCCCGTTGGTTATTATCTTCTTGGTGATTATTTTTCTGGTAATACCTGGAAGTGTGACCATCCTCGTCCTATACTTGCTAGTCACTGTTCTCTTAGCTCTACCATCCTTCTTGGTGTTATATTTTGCATACCCTACATTGGATTGGTTATTGAGAGAAATCGCCAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_182333.p1 GENE.S_Transcript_182333~~S_Transcript_182333.p1 ORF type:complete len:269 (+),score=21.35,zf-RING_UBOX|PF13445.2|3.3e-08,zf-RING_2|PF13639.2|1.6e+04,zf-RING_2|PF13639.2|2.8e-06,zf-RING_5|PF14634.2|7.4e+03,zf-RING_5|PF14634.2|5e-06 S_Transcript_182333:321-1127(+)
MWSFSNSFSNLRLRKVYTEPNLCCSELSDDDAGSSSSSREEGLECPICWESFNIVENVPYVLWCGHTLCQNCVLGLQWAILKLPAQKIQLPFFVSCPWCNLLSFRLVYRGNLRFPRKNYFILWMIESLNGERAKSACMLRGDNQSVLSPRRSLLTRGSSSSTYSPRRVQPTHFRGRLGSNLDDTQINNRINVERPQFSLHKSLDYFIHLVAKFPLVIIFLVIIFLVIPGSVTILVLYLLVTVLLALPSFLVLYFAYPTLDWLLREIAS*

Click here to download the sequence:
Link to NCBI Protein BLAST