Transcript Information: S_Transcript_182801.p1


Annotated TAIR IDAT5G63860.1
Annotated Gene NameRegulator of chromosome condensation (RCC1) family protein
Annotated Gene Symbol(s)UVR8
Annotation TypeOrtholog
Chromosome Positionchr5:25554821-25558587 | Reverse length=440
E-Value3.6E-56
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 123.83599241064
Replicate 236.259715011916
Replicate 332.555438478008
Condition 2: 8 Hour
Replicate 125.961344733901
Replicate 224.51176459657
Replicate 325.022951536282
Condition 3: 24 Hour
Replicate 134.951813584951
Replicate 229.167340115647
Replicate 332.67899666402


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_182801.p1 GENE.S_Transcript_182801~~S_Transcript_182801.p1 ORF type:3prime_partial len:115 (+),score=24.06,RCC1|PF00415.14|2.8,RCC1|PF00415.14|5.5e-15,RCC1|PF00415.14|0.00034,RCC1_2|PF13540.2|1.1e-06,RCC1_2|PF13540.2|0.0025 S_Transcript_182801:28-342(+)
ATGGAGATTGAGGAACTATCTAAGACTTCCGAACAGGGTGTTCGTCATATCCTTCTTATATCTGCTGGTGCTAGCCACTCTATTGCGCTTCTCTCTGGAAATGTGGTTTGCTCTTGGGGAAGAGGGGAGGATGGGCAATTAGGCCATGGAGACGCCGAAGATCGTTTTTCTCCTGTACAACTGAGTGCCCTGGATGGACATGAAGTTAATTCCATTACTTGTGGAGCTGATCATACCCTTGCATATTCTGAGCCGCGTTTGCAAGTCTACAGTTGGGGATGGGGAGATTTTGGGAGGTTGGGTCATGGAAACTCC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_182801.p1 GENE.S_Transcript_182801~~S_Transcript_182801.p1 ORF type:3prime_partial len:115 (+),score=24.06,RCC1|PF00415.14|2.8,RCC1|PF00415.14|5.5e-15,RCC1|PF00415.14|0.00034,RCC1_2|PF13540.2|1.1e-06,RCC1_2|PF13540.2|0.0025 S_Transcript_182801:28-342(+)
MEIEELSKTSEQGVRHILLISAGASHSIALLSGNVVCSWGRGEDGQLGHGDAEDRFSPVQLSALDGHEVNSITCGADHTLAYSEPRLQVYSWGWGDFGRLGHGNS

Click here to download the sequence:
Link to NCBI Protein BLAST